Lysinibacillus fusiformis: HR49_06650
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Entry
HR49_06650 CDS
T03655
Name
(GenBank) ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
lfu
Lysinibacillus fusiformis
Pathway
lfu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HR49_06650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfu03032
]
HR49_06650
Enzymes [BR:
lfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
HR49_06650
DNA replication proteins [BR:
lfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
HR49_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
TBP
Motif
Other DBs
NCBI-ProteinID:
AJK86867
LinkDB
All DBs
Position
complement(1348271..1349197)
Genome browser
AA seq
308 aa
AA seq
DB search
MSNIVLSISTNIQKEVMAYYASNYIERKAAGVIFAAKLPDTSITMYKSGKLMFQGGGAER
EAARWGTIEKTSNSKSSSIGAKGDTLPDQFATMSVLGSDETGTGDYFGPITVAAVYVPAS
KIELINELGVKDSKMLSDDYMRKIAPDLRAACVHSVLVLRNEKYNSLQAKGYSQGKMKAM
MHNKALQNTLTKMAPEKPECILIDQFAERGVYYNYLKTEREIVQESVYFSTKAEQLHVAV
ATASILARAAFLKEMDRLSEIAGLELMKGASSKVDVQAARIWRKQGEEFLRSITKWHFAN
TEKARKMI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattgtactttccatttcaacaaatattcaaaaagaggtgatggcatactat
gcatccaattatattgaacgcaaggctgctggtgtaatcttcgccgcaaaactaccagat
acctccataaccatgtataaatcaggaaaattaatgtttcagggtggtggagctgaacgt
gaagctgcccgctgggggaccattgaaaaaacatcgaactcaaaatcatctagtattgga
gcaaagggtgatacactacccgaccaatttgcaacgatgtccgtattaggctcagatgaa
acaggcactggtgattattttggccctattacagtagctgccgtatatgtacctgcctcc
aaaattgaactgatcaatgagcttggtgtcaaagattcaaaaatgttatcggatgattac
atgcggaaaattgctcctgatttacgcgcagcttgcgttcatagtgttctcgtcttacgc
aatgaaaaatataacagcttacaggcaaagggttactctcaagggaaaatgaaagccatg
atgcataacaaggcactgcaaaacacactgacaaaaatggctcctgagaaacctgaatgt
attttaattgatcagtttgcagaacgaggcgtttattacaattacttaaaaaccgaacga
gaaattgtacaggaaagcgtgtacttttctactaaagccgagcaattacatgtagccgtg
gctacagcatccattctagctcgtgctgcgtttttaaaggaaatggatcgtctcagtgaa
atagcgggtttagagttaatgaaaggggcctctagcaaggtagatgtgcaagctgcacgt
atttggcgtaaacaaggcgaagaatttctacgctccattacaaaatggcattttgctaat
acagaaaaagcgagaaagatgatttaa
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