Lysinibacillus fusiformis: HR49_20225
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Entry
HR49_20225 CDS
T03655
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lfu
Lysinibacillus fusiformis
Pathway
lfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HR49_20225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfu03400
]
HR49_20225
DNA repair and recombination proteins [BR:
lfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HR49_20225
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HR49_20225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
UB2H
AAA_22
AAA_16
AAA_30
AAA_19
HEM4
HerA_C
AAA_7
TrwB_AAD_bind
AAA
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AJK89305
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All DBs
Position
complement(4092926..4094905)
Genome browser
AA seq
659 aa
AA seq
DB search
MQTFDLQAPYQPNGDQPQAIAELVEGVKAGKRHQTLLGATGTGKTFTISNVIQQVKKPTL
IMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINDEIDK
LRHSATSALFERDDVIIIASVSCIYGLGSPEEYREMVVSIRTGMEIERNQLLRKLVDVQY
ERNDVSFTRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEILSDREHV
AIFPASHFVTREEKMRKAIENIEKELEDRLALLRAEDKLLEAQRLEQRTRYDLEMMREMG
FCSGIENYSRHLTLREAGATPYTLLDYFPEDFLLVVDESHVTLPQVRGMYNGDQARKGVL
VEHGFRLPSALDNRPLRFEEYENRVHQAIYVSATPGPYELEHTPEMIQQIIRPTGLLDPL
IDVRPIEGQIDNLIDEIQDRIARDERVLVTTLTKKMSEDLTAYLKEMGLKVEYLHSEIKT
LERIEIIRELRKGTYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNANGHVIMYADHVTDSMKKALDETKRRRELQMAYNEEHGITPQTISKKIPEVIRATQV
AEEEESYVTKATKGKKLTKAERDQLLASLEIEMKEAAKALDFERAAELRDTIFELKVEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacttttgatttacaagcgccatatcagcctaatggagatcagccacaggcaatt
gcggaattagtggagggtgtgaaggcaggcaagcgtcatcaaacattacttggtgcaaca
ggaactgggaaaacatttacgatttcaaatgtaatccagcaggttaaaaaaccgacactt
attatggcacacaataaaacgttggcgggccaattatatagtgagttcaaagagttcttt
ccaaataacgctgtagaatactttgttagttactatgattattaccagccagaagcctat
gtaccgcagacagatacttatatagaaaaggattctagcattaacgatgaaattgataag
ctgcgccactctgcaacttctgcattatttgagcgtgatgatgtcattattattgcatct
gtatcctgtatttacggtcttggttctcctgaagaatatcgtgaaatggttgtatcgatc
cgcacaggtatggaaattgaacgtaatcagctactgcgcaaacttgtagatgttcaatat
gagcgcaatgatgttagttttacacgcgggacgtttcgggtacgaggagatgtagtagag
attttcccagcctcacgtgatgagcattgtattcgtgtcgagttttttggggacgaaatt
gatcgcattcgtgaggtagatgctttaactggagaaatactatcagatcgagagcatgtc
gctattttcccagcatcccacttcgttacacgagaagaaaaaatgcgaaaagcgatagaa
aacattgaaaaagaattagaggatcgtctagctttactgcgtgccgaggataaattatta
gaggctcagcgtctagagcaacggacacgttatgatttagaaatgatgcgggaaatgggc
ttttgttcagggattgagaactattcgcgtcacttaactttacgtgaagcaggtgcgact
ccatatacgttgcttgattatttccctgaggactttttgcttgtcgtagatgaaagtcac
gtaactcttccgcaggtacgagggatgtacaacggtgaccaagcacgtaaaggggtactt
gttgagcatggtttccgcctgccatctgcgctagataaccgtccattacgttttgaagaa
tacgaaaatcgagtacatcaagctatttatgtatctgcaacacctggaccctatgagttg
gagcatactcctgaaatgatccagcaaattattcgacctactggtttactggatccatta
attgatgtccgcccaattgaagggcaaatagataacttgatcgatgaaattcaagatcgt
attgcacgtgatgaaagagtgttagtaacaacactaacaaagaaaatgtcagaggactta
acggcttatttgaaggaaatgggcttaaaggttgagtatttgcattctgagattaaaaca
ttagagcgtattgagattatccgtgagctacggaagggcacttatgatgtactaattgga
attaacttattgcgagaaggacttgatattcctgaagtatcacttgtagccatattagac
gctgataaagaaggatttttacgttcagaacgttcactcattcaaacgattggccgagct
gcgcgtaatgcgaacggtcatgtcattatgtatgcagatcatgtaaccgactcgatgaaa
aaggcgctcgatgaaacaaaacgtcgtcgtgaattgcaaatggcatataacgaagagcat
ggtattacgcctcaaactattagtaaaaaaataccagaagtaattcgtgctacacaagtg
gcagaagaagaagaatcctatgtaacaaaggcgacgaagggcaaaaagctgacaaaggca
gaaagagaccagctcttagcttctctagaaatagaaatgaaggaagcagcaaaagcgctt
gatttcgaacgtgcagctgagcttcgagatacaatatttgaattgaaggtagaagggtga
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integrated database retrieval system