KEGG   Lysinibacillus fusiformis: HR49_20225
Entry
HR49_20225        CDS       T03655                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lfu  Lysinibacillus fusiformis
Pathway
lfu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HR49_20225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfu03400]
    HR49_20225
DNA repair and recombination proteins [BR:lfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HR49_20225
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HR49_20225
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD P-loop_SecA UB2H AAA_22 AAA_16 AAA_30 AAA_19 HEM4 HerA_C AAA_7 TrwB_AAD_bind AAA Oxidored_nitro
Other DBs
NCBI-ProteinID: AJK89305
LinkDB
Position
complement(4092926..4094905)
AA seq 659 aa
MQTFDLQAPYQPNGDQPQAIAELVEGVKAGKRHQTLLGATGTGKTFTISNVIQQVKKPTL
IMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINDEIDK
LRHSATSALFERDDVIIIASVSCIYGLGSPEEYREMVVSIRTGMEIERNQLLRKLVDVQY
ERNDVSFTRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEILSDREHV
AIFPASHFVTREEKMRKAIENIEKELEDRLALLRAEDKLLEAQRLEQRTRYDLEMMREMG
FCSGIENYSRHLTLREAGATPYTLLDYFPEDFLLVVDESHVTLPQVRGMYNGDQARKGVL
VEHGFRLPSALDNRPLRFEEYENRVHQAIYVSATPGPYELEHTPEMIQQIIRPTGLLDPL
IDVRPIEGQIDNLIDEIQDRIARDERVLVTTLTKKMSEDLTAYLKEMGLKVEYLHSEIKT
LERIEIIRELRKGTYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNANGHVIMYADHVTDSMKKALDETKRRRELQMAYNEEHGITPQTISKKIPEVIRATQV
AEEEESYVTKATKGKKLTKAERDQLLASLEIEMKEAAKALDFERAAELRDTIFELKVEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
gtgcaaacttttgatttacaagcgccatatcagcctaatggagatcagccacaggcaatt
gcggaattagtggagggtgtgaaggcaggcaagcgtcatcaaacattacttggtgcaaca
ggaactgggaaaacatttacgatttcaaatgtaatccagcaggttaaaaaaccgacactt
attatggcacacaataaaacgttggcgggccaattatatagtgagttcaaagagttcttt
ccaaataacgctgtagaatactttgttagttactatgattattaccagccagaagcctat
gtaccgcagacagatacttatatagaaaaggattctagcattaacgatgaaattgataag
ctgcgccactctgcaacttctgcattatttgagcgtgatgatgtcattattattgcatct
gtatcctgtatttacggtcttggttctcctgaagaatatcgtgaaatggttgtatcgatc
cgcacaggtatggaaattgaacgtaatcagctactgcgcaaacttgtagatgttcaatat
gagcgcaatgatgttagttttacacgcgggacgtttcgggtacgaggagatgtagtagag
attttcccagcctcacgtgatgagcattgtattcgtgtcgagttttttggggacgaaatt
gatcgcattcgtgaggtagatgctttaactggagaaatactatcagatcgagagcatgtc
gctattttcccagcatcccacttcgttacacgagaagaaaaaatgcgaaaagcgatagaa
aacattgaaaaagaattagaggatcgtctagctttactgcgtgccgaggataaattatta
gaggctcagcgtctagagcaacggacacgttatgatttagaaatgatgcgggaaatgggc
ttttgttcagggattgagaactattcgcgtcacttaactttacgtgaagcaggtgcgact
ccatatacgttgcttgattatttccctgaggactttttgcttgtcgtagatgaaagtcac
gtaactcttccgcaggtacgagggatgtacaacggtgaccaagcacgtaaaggggtactt
gttgagcatggtttccgcctgccatctgcgctagataaccgtccattacgttttgaagaa
tacgaaaatcgagtacatcaagctatttatgtatctgcaacacctggaccctatgagttg
gagcatactcctgaaatgatccagcaaattattcgacctactggtttactggatccatta
attgatgtccgcccaattgaagggcaaatagataacttgatcgatgaaattcaagatcgt
attgcacgtgatgaaagagtgttagtaacaacactaacaaagaaaatgtcagaggactta
acggcttatttgaaggaaatgggcttaaaggttgagtatttgcattctgagattaaaaca
ttagagcgtattgagattatccgtgagctacggaagggcacttatgatgtactaattgga
attaacttattgcgagaaggacttgatattcctgaagtatcacttgtagccatattagac
gctgataaagaaggatttttacgttcagaacgttcactcattcaaacgattggccgagct
gcgcgtaatgcgaacggtcatgtcattatgtatgcagatcatgtaaccgactcgatgaaa
aaggcgctcgatgaaacaaaacgtcgtcgtgaattgcaaatggcatataacgaagagcat
ggtattacgcctcaaactattagtaaaaaaataccagaagtaattcgtgctacacaagtg
gcagaagaagaagaatcctatgtaacaaaggcgacgaagggcaaaaagctgacaaaggca
gaaagagaccagctcttagcttctctagaaatagaaatgaaggaagcagcaaaagcgctt
gatttcgaacgtgcagctgagcttcgagatacaatatttgaattgaaggtagaagggtga

DBGET integrated database retrieval system