KEGG   Leopardus geoffroyi (Geoffroy's cat): 123581466
Entry
123581466         CDS       T10761                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123581466 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgf03041]
    123581466 (SF3B6)
Spliceosome [BR:lgf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123581466 (SF3B6)
 Complex B
    123581466 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    123581466 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 123581466
NCBI-ProteinID: XP_045303541
LinkDB
Position
A3:121381495..121391804
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagagggcgaacattcgacttccacctgaagtaaatcggatt
ttatacataagaaatttgccgtacaaaatcacagctgaagaaatgtatgatatatttgga
aaatatggacctattcgtcaaattcgagtggggaacacacctgaaaccagaggaacagct
tatgtggtctatgaagacatctttgatgccaaaaacgcatgtgatcacctttcgggattc
aatgtttgtaacagatacctggtggttttgtactataatgccaacagggcatttcagaag
atggacacaaaaaagaaggaagaacagttgaagcttctcaaggagaaatacggcatcaac
acagatccaccaaaataa

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