Leopardus geoffroyi (Geoffroy's cat): 123596252
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Entry
123596252 CDS
T10761
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04360
Axon guidance
lgf04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123596252 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
123596252 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123596252 (TRPC4)
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123596252 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
123596252
NCBI-ProteinID:
XP_045330709
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All DBs
Position
A1:complement(16344498..16544638)
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AA seq
981 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRIQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQATKESSNSA
DSDEKSDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHISNGSALVVQEPPREKQRKV
NFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEVARQQAERPLERNIQLESRGLASRGD
LNIPGLSEQCILVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDSS
IDYDGNLTDTATHEDYVTTRL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaacgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcggaatccgaactctcaccatcagaaaaagcctacttaaatgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcatcgaactacttttaagctttaatgtctatgttggagatgctcta
ttacacgctattaggaaagaagttgttggagctgttgagctgttactgaatcacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattatgagataataaagctt
ttagttcagaaaggagtttcggtgcccagaccccacgaggtccgctgtaactgtgtcgaa
tgcgtctccagttcagatgtggatagcctccgccattcacgctcaagactcaacatctac
aaggccttggccagcccctctctcatcgcactgtcaagtgaggaccctttcctcacagcc
tttcagttaagttgggagcttcaggaactgagtaaggtggagaacgaattcaagtcagag
tatgaagagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agctccagagaactggaaatcattcttaattacagagatgacagtagtctcatagaagaa
caaagcggaaatgatctcgcaagactaaaattggctataaagtaccggcaaaaagagttt
gttgctcagcccaactgtcaacaactgcttgcatctcgctggtatgatgagttcccaggc
tggaggagacgacactgggcagtgaagatggtgacgtgtttcataataggactccttttt
cccgtcttctctgtgtgctatcttatagctcctaaaagcccactgggactgttcatcaga
aagccctttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacaatctctttgaaaatcgttgcatttgtaaagtacagt
gctctgaatccacgagaatcttgggacatgtggcatcccactctagtggctgaagcttta
tttgccatcgcaaacatcttcagttccctgcgcctgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagttccta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcaattgtatttctat
tatgaagaaacaaaagggttaagctgtaaaggcatacgatgtgaaaagcagaacaatgca
ttttcaacgttatttgagacactccagtccctattttggtcaatatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgttggtgccacgatg
tttgggacatacaatgtcatctctctggtggtcctactcaacatgttaatagctatgatg
aataattcgtaccaactcattgctgaccatgcagatatagaatggaagtttgctcgaaca
aagctttggatgagttatttcgaagaaggaggtactctgcccactcccttcaatgtcatc
ccgagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagcctgaaagttttggaacaataggggtaagaatacagcataggcga
gctgctgataatttgagaagacatcaccagtatcaagaggttatgcggaacctggtgaag
aggtatgttgccgcaatgatcagagatgccaaaactgaagaaggtctgactgaagagaac
tttaaggaactaaagcaagacatttctagtttccgctttgaagtcctggggttactaaga
ggaagcaagctctctaccgtccagtcggctcaggccacaaaggagtcctccaactctgcg
gactcggatgaaaagagtgacaacgaaggcagtagcaaagacaagaaaaagaacttcagc
cttttcgatttaaccaccctgattcacccgcgatcggcagcgattgcctccgaaagacac
atcagcaatggctccgccctagtggtgcaagagcccccaagagagaagcagagaaaagtg
aactttgtgaccgatatcaaaaacttcgggttatttcacagacggtcgaaacaaaacgct
gctgagcaaaatgcaaaccaaatcttctctgtttcagaagaagttgctcgtcagcaggcc
gaaagaccactggagagaaacattcaactggaatcccgagggttagcttcgcgaggtgac
ttgaacatccctggtctcagtgaacagtgtatcttagtagaccatcgagaaaggaacaca
gacaccctgggtttacaggtgggcaagagagtgtgttccttcaagtcggagaaggtggtg
gtggaggacactgttccaataataccaaaggagaagcacgcaaaggaagaggactccagt
atagactacgatggaaacctcacggacacagccacccacgaagattatgtgaccacaaga
ttgtga
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