Leopardus geoffroyi (Geoffroy's cat): 123599009
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Entry
123599009 CDS
T10761
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
123599009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgf04040
]
123599009
Ion channels [BR:
lgf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123599009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
FraC
Motif
Other DBs
NCBI-GeneID:
123599009
NCBI-ProteinID:
XP_045336011
LinkDB
All DBs
Position
C1:154622047..154762675
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTSFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESREFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEDKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPVNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETELRKRRSSSYHVSMDLLEDPTARQRAMSLASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAVVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGEGTPIKDDILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgtaaggatgaggatgatgaaaatggcccaaagccaaacagtgacttggaagcagggaaa
tctctgccatttatttatggagacatccctccagagatggtgtcagagcccttggaggac
ctggacccgtactatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcgattcagtgccactcctgccctgtacattttaactcccttcaaccccattagaaaa
ctagctattaagattttggtacattctttattcaatgtgctcattatgtgcaccattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctgcgggatccatggaattggttggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcactgaaaacaatttcagtcattccaggcctgaagaccattgtaggggcc
ctgatccagtcagtgaagaagctctctgatgtaatgattctgaccgtgttctgtctgagc
gtgtttgcactaataggactacagctgtttatgggcaacctgcggaataaatgtttgcaa
tggcccccagataattcatcctttgaaataaacatcacttccttctttaataactcattg
gatgggaatggtaccagtttcaataggacagtgagcatgtttaactgggatgaatacatt
gaggataaaagtcacttttattttttggaagggcaaaatgacgctctgctttgtggcaac
agctcggatgcaggccaatgcccagaaggatacatctgtgtgaaggctggtagaaacccc
aactatggctatacaagctttgacacctttagttgggctttcttgtccttatttcgtctc
atgactcaagacttctgggagaacctttaccaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctacctgataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaaccctcgaggaagctgaa
cagaaagaagctgaatttcaacagatgctcgaacagttaaaaaagcaacaagaggaagct
caggcagcagctgcggcagcatctgctgaatcaagagagttcagtggtgccggcgggata
ggcgttttctcagagagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaatagaaggaagaaaaagaagcagaaagaacagtctggagaagaagacaaagaa
gacggagtccgcaaatcggaatccgaagacagcataagaagaaaaggtttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcttctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcgagccttttcagtttc
agaggtcgagcgaaggatattggctctgagaatgactttgccgatgatgagcacagcacc
tttgaagacaatgacagcaggagagactctctgtttgtgccacaccgacacggagagcgg
cgtcacagcaacgtcagccaggccagccgcgcctcccgggtactccccattctgccggtg
aacgggaagatgcacagcgccgtggattgcaacggagtggtgtccctggtgggggggcct
tctgctctcacgtctccagctggacaactccttccagagggcacaactactgaaacagaa
ctaagaaagagacgatccagttcttaccatgtttccatggacttgctggaagatcctacg
gcaaggcaaagagcaatgagtctagctagtattttgaccaacactatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtacaaatttgctaacatgtgtttgatttgg
gattgctgtaaaccatggttaaaggtgaaacatctcgtcaacctggttgtgatggaccca
tttgttgacctggccatcaccatctgcattgtcttaaatactcttttcatggccatggag
cattatcctatgacggagcaattcagcagcgtgctgtcagtcggaaacctggtcttcact
gggatcttcacagcagaaatgtttctgaagataattgccatggatccatattattacttt
caagagggctggaatatttttgatggcttaatcgtgagccttagtttaatggagctcggt
ttggcaaacgtggaaggattgtcagttctccgatcatttcggctgctccgagttttcaag
ttggcaaaatcctggcccaccctgaatatgctgataaagatcattggcaattctgtgggg
gctctaggtaatctcaccttggtgttggccatcatcgtcttcatttttgccgtggttggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgag
ctcccacgctggcacatgcatgacttcttccactctttcctgattgtgttccgcgtactg
tgtggagagtggatcgaaaccatgtgggactgtatggaagtcgctggccaaaccatgtgc
cttactgtcttcatgatggtcatggtgattggaaacctggtggttctgaacctcttcctg
gccttgctcttgagttcgttcagttctgacaaccttgccgccactgatgatgataatgaa
atgaacaatctccagattgctgtggggaggatgcagaaaggaattgattatgttaagaga
aaactacgtgaatttattcagaaagcctttgttagaaagcaaaaggctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccataccactata
gaaataggcaaagatctcaattatctcaaagatggaaatggaactaccagtggcataggc
agcagtgtcgaaaaatatgttgtggatgaaagtgattatatgtcattcataaacaatccc
agcctcactgtgactgtaccaattgctgtcggagagtccgactttgaaaatttaaatact
gaagaattcagcagtgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggtgagcaacctgaggta
gaacctgaagaatccctggaacctgaagcctgtttcacagaagactgtgtacggaagttc
aagtgttgtcagataagcatagaagaaggcaaaggaaaactctggtggaacttgagaaaa
acttgctataagatagtggagcacaactggtttgaaaccttcattgtcttcatgattcta
ctcagcagtggggcactggcctttgaagacatatatatcgagcagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttcta
aagtgggttgcgtatggttttcaaatgtatttcaccaatgcctggtgctggctagatttc
ctcattgttgatgtctcattggttagcctgactgcaaatgccttgggttactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccattgagagccttatcccgg
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggctcatattcagtatcatgggagtgaatctcttt
gctggcaagttttatcattgtattaactacaccactggagaaatgtttgatgtaagtgtg
gtcaacaactacagcgaatgtaaagccctcatagagagcaatcaaactgccaggtggaaa
aatgtgaaagtaaactttgataatgtaggacttggatatctttctctgcttcaagtagcc
acatttaagggatggatggatatcatgtatgcagctgttgattcacgaaacgtagaatta
caacccaagtatgaagacaatctgtacatgtacctttattttgtcatctttattattttt
ggttcgttctttaccctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagagcagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaaacccatccctcggcccgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatt
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaggaaatg
acaaacattctgtactggattaatctggtgtttattgttttgttcactggagagtgtgtg
ctgaaactaatctctcttcgttactactatttcaccatcggatggaatatttttgatttt
gtggtggtcattctctctatcgtaggtatgtttctggctgagctgatagaaaaatacttc
gtgtcccctaccctgttccgagtgatccgtctcgccaggattggtcgaatcttgcgtctg
atcaaaggggcgaaggggatacgcacgctgctctttgctctgatgatgtcccttcccgcc
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcgtatgttaagagggaagttggaattgatgacatgttcaactttgagacc
ttcggcaacagcatgatctgcctgttccaaattaccacctctgctggttgggatggattg
ctagcacccattcttaatagtggacctccagattgtgaccctgaaaaagatcaccctgga
agctctgttaaaggagactgtggaaacccatctgtggggatcttcttttttgtcagttac
atcattatatcgtttctagttgtggtgaacatgtacatcgctgtcatcctggagaacttc
agtgtcgctactgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtttgggagaagttcgatcctgatgccacccagtttatagagttctccaagctctct
gattttgcagctgccctagatcctcctctcctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggcgaccggatccactgcctcgacattttattt
gccttcacaaaacgtgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaggagcggttcatggcatcgaacccctccaaagtctcctacgaacccatcacgaccact
ctgaaacgcaagcaagaggaggtgtctgctgttgttatccagagggcttatagacgctac
ctcttgaagcaaaaagtgaaaaaggtttcgtgtatctataagaaagacaaaggcaaagaa
ggcgagggaacacctatcaaagacgatatcctcattgataaactaaatgagaattcgact
ccagagaaaaccgacgtgacaccctccaccacttctccaccctcgtatgacagtgtcacc
aaaccggaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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