Leopardus geoffroyi (Geoffroy's cat): 123608245
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Entry
123608245 CDS
T10761
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123608245 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123608245 (PHF1)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123608245 (PHF1)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123608245 (PHF1)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123608245 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
Prok-RING_1
PHD_2
PHD_ash2p_like
Chromo
DUF4537
ASH2L-like_WH
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
123608245
NCBI-ProteinID:
XP_045353869
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All DBs
Position
B2:32417919..32423436
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AA seq
567 aa
AA seq
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MAQPPRLSRSGAPPLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGPSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVEPLTGDGAPTSFPSGQGPGGG
VSRPLGKRRRPEPEPLRRRQKGKMEELGPPSAVRNQPEPQEQRERARLQRALQASVSPPT
PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIG
FPTDIPKSAPHSMTASSSSVPAPSPGLPRRSAPASPLCRSLSPGTGGGVRGGVGYLSRGD
PVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccccccggctgagccgctctggtgcccccccactttgggacccagcctcc
cctgctcccacttcaggccccaggcctcgactttgggagggtcaagatgttttggccaga
tggacggatgggctgctatacttggggaccatcaagaaggtggacagtgctcgggaggtg
tgtctggtccagtttgaggacgattcccagtttctggttctatggaaagacattagcccc
gctgccctccctggggaggaactcctctgctgtgtctgtcgctctgagactgtggtccct
gggaaccggctggtcagctgtgagaagtgtcgccacgcttatcaccaggactgccacgtt
cccagagctccagcccctggagagggagagggcccatcctgggtctgccgccagtgtgtc
ttcgccatcgccaccaagagggggggtgcactgaagaagggcccttacgcccgggccatg
ctgggcatgaagctgtcactgccatatggactgaaggggctcgactgggacgctggacat
ctgagcaaccggcagcagagctactgttactgtggtggtcctggggagtggaacctgaaa
atgctgcagtgccggagctgcctgcagtggttccatgaagcctgcacccagtgtctgagc
aagcccctcctctatggggacaggttctatgagtttgaatgctgtgtgtgtcgggggggc
cctgagaaggtcaggaggctacagcttcgctgggtggatgtggcccatcttgtcctctat
cacctcagcgtttgctgtaagaaaaaatactttgattttgaccgtgagatcctcccgttc
acctctgagaattgggacagtttgctcctcggggagctctcagatacccccaagggagaa
cgttcttccaaactcctctctgctctcaacagccacaaggaccgtttcatttcagggagg
gagattaagaagaggaaatgtttgtttggtcttcatgctcggatccctccccccgtagag
ccccttactggagatggagcccccaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgccggaggccggagccagagcccctgaggaggaggcag
aaggggaaaatggaggagctggggccaccctcagcagtgcgcaatcagcccgagccccag
gagcaaagggagcgggctcgtctgcagagggcactgcaggcctcagtgtctccaccaacc
cccagccctaaccagagttaccagggcagcagcggctacaacttccggcccacagacgcc
cgctgcctgcccagcagtcccatccggatgttcgcttccttccacccctctgccagcacc
gcagggacctctggggatggtgaacccccagacaggtcacccctggaacttcacattggt
ttccccacagacatccctaaaagtgccccccactcgatgactgcctcatcttcctcagtc
ccagccccctccccaggtcttcctagacgctcagcacccgcttctcccctgtgccgtagt
ttgtctcctgggactgggggaggagtccgaggtggggttggctacctgtcccgaggggac
cctgtccgggtccttgctcggagagtacggcctgatggttctgtgcagtacctggttgag
tggggaggtgggggcatcttctga
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