Leopardus geoffroyi (Geoffroy's cat): 123608500
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Entry
123608500 CDS
T10761
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123608500 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123608500 (TTC37)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
123608500 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
Sel1
ARM_TT21_2nd
Fis1_TPR_C
TPR_5
TPR_30
TPR_15
ARM_TT21_5th
TPR_20
BTAD
TPR_6
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
123608500
NCBI-ProteinID:
XP_045354481
LinkDB
All DBs
Position
A1:complement(157247671..157415239)
Genome browser
AA seq
1565 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKEDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEEGADNQELHQLWRRLTQLLAESTEDQNNETQQ
LLLTAFENALGLSENIPSEDHQVLYRHFIQCLSKFPHEIARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGQQYCRRLVEMDSKSGPGFIGLGIKALQDRKYEDAVRNLTEGLK
ESPLCTTGWYHLAEAQVKMHRAKEAVLSCSQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYPQAEKCFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYHQAQHLAETGNNTNDLKELLEKSLQCLKKAVRLDSKNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELNMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIVQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLRKEAAGAYQRAMLLLQSVEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSV
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLTMQDPTL
SKAALNELLKHIKQKDSNYHKCLLSSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTHRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEAEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHAEDKLALVDNTEPKRMDLYLALLSAVSASIRDKEFLENY
NQSLEKWSLSQAVTGLIDTGRLAEAEGLCTKNLKSNPDQPAVILLLRQVQCKPLLDSQNP
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQCQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKACMANIPNNHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLERVVYHQPGFPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQ
KLSSQ
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattgctggcttggcaggggtta
gcaagtttatatgagaaatgtaatcacataaatgctaaggaagacttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctatattaccaagaaaagaaacacctagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagcttcatcagctgtgg
aggagattgactcagttgctggctgagagtactgaggatcagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactgggcttatcagaaaatattcctagtgaagat
caccaagtactttatagacatttcattcagtgtttatccaaatttcctcatgaaattgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttgattgaatcaggcagtcttactgatgaaggacagcagtat
tgtcgcagactagtggaaatggattcaaaaagtggtccaggcttcattggtttggggatt
aaagcattacaagacagaaagtatgaagatgctgttaggaacctaactgaagggttaaag
gaaagccctctttgcacaacggggtggtatcatctggccgaagcccaagttaaaatgcat
agagctaaggaagctgttctttcatgcagtcaagctctgaagaacatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcaatctgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaataaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttgattcattttaccaaaaaggactatccacaagcagag
aaatgtttccagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttact
cactttctaaaggctgccagactggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagcg
tttgagttagatgatactgatgctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagagatggaaactgccttagccatcctaacaacagtaactcaaaaggcaagtgct
ggaacagcaaaatgggcctggctgaggcgcggactgtactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctataccacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagattatgtgccagctttgaaaggtttgggtgaatgccatcttatgatggca
aaagcagctctagtggattatcttgatgggaaagctgtggactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtaaatgttaatgtttta
ggagtcctcctaggtcagaaagaaggaaaacaagtattaaagaagaatgagctcctccat
cttggaggaaggtgttatggtcgtgcattaaaactgatgtccacatctaatacatggtgt
gatctcggaattaattattaccatcaagcacaacatctagcagaaaccggcaacaacaca
aatgatcttaaagagttgttggagaaatctttacagtgtctgaaaaaggcggtgagactc
gacagtaaaaaccatttatactggaatgctcttggtgtggtttcatgttacagtggtatt
ggaaattacgcccttgctcagcattgtttcatcaagtcaatccaatcagaacaaattaat
cctgttgcatggaccaacttgggagtcttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttaatgtgctggattgga
caagctcttatcgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acagagcttaatatgcataccgagggagcaataggttatgcttattgggtctgtacaaca
ttgcaagataaaagcaacagagatactgagctgtaccggtacaatatcgttcagatgaat
gctattccagccgcacaagttgttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgagaaaggaagcagca
ggtgcataccaaagggcaatgttattgttacaaagtgtggaagaccaagatacttataat
gttacagtaagaaattatggcagattattatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacacctcttgaagagttagaagacatcataggtttcgcattggct
ttatttatgaaaggtctatataaggaaagcagcaaagcctatgagagagccttgtctgtt
gttgaatcagagcaggacaaagcgcatatcttgacagctctagcaataacagagtataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaacca
accacagaaagccttcaagccttgtgtgctctaggattgacaatgcaggatcctacactg
tcaaaagcggcacttaatgaattactgaagcacatcaagcagaaagacagtaattatcac
aagtgccttctttcttcagcaatttatgcactgcaaggccgcagtgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtagttgctcagtatactcaccgaagtgcaaagggaggtgctgttgcaggaaatgtg
gctcatattttggactcaaatcatggaaagaaggcgttactgtatactgcggtaaatcag
ttagctatgggaagcagttcagcagaagctgaaaaaaatattgcactaaagaccattcag
aaagcagctcttctttctccaggtgaccctgccgtctgggctgggctaatggcagcctgt
catgctgaagataaactggctctagtggacaacactgagccgaagagaatggatttgtac
ttggccctgttatctgctgtttctgcttcaattagagacaaagaattccttgaaaattat
aaccaatctctggaaaagtggtctctctcccaagctgtcactggtctaatagacacagga
agactagctgaagctgaaggcctctgcacaaagaatttaaaaagtaaccctgatcagcca
gctgttatcttactcctgagacaagttcagtgtaaaccactcctggattcacaaaaccct
ctcccagatgctgtacttgaagagctgcagaaaacagtcatgtccaattcaacttctgtt
ccagcatggcagtggctggcacacgtgtatcagtgccaaggaatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccagcagggcagttggagtgggaagctg
tcaagtctgttgagactagctctacttgctttaaaagcctgcatggctaatattcccaat
aatcactggtcatctttggttcaagaagctacaactgaggccttgaaactttgcttttgt
ccattggctgtctttttacaagctttgttacaattcaaccgcaaaatgggggcaagagag
acacggcgacttttggaaagagtggtgtatcatcaaccggggtttcccaagtctattgta
tcaactgcacgttggtacctgctgagacacttacatgccaaaaatgactacgaacttatt
gatgtgctggtaaacaatgccaaaactcatggagatacaagagcattggaattgaatcag
aaattgtcctcacagtaa
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integrated database retrieval system
