Lottia gigantea (owl limpet): LOTGIDRAFT_113626
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Entry
LOTGIDRAFT_113626 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K23600
TAR DNA-binding protein 43
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_113626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_113626
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
LOTGIDRAFT_113626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP43_N
RRM_1
RRM_7
RL
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
20230988
NCBI-ProteinID:
XP_009049964
JGI:
113626
UniProt:
V4AQH1
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MNQYIQVAEEEGEEPMEVPSEDDGTLLLTTLAAQFPGSCGLKYRNPDTGSMRGIRLSDGR
LYPPDGTWARNVYIAVFPKDTRKKTEELPDASMSLLNRKKEKVKCSDLIVLGLPWKSTED
DLRKYFVQFGDLLMVQVKKDIKTGHSKGFGFVRFADYDAQVQCISQRHMIDGRWCDVRIP
NSKEGNHNLMNRKVFVGRCTDDMTAEDLRSYFSKFGEVVDVFIPKPFRAFAFVTFSDSDT
AQTLCGEDHIIKGASVHISSAAPKNNEK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatatattcaggtagctgaggaggaaggcgaggaacccatggaggttccaagc
gaagacgatggaacgctactcttgactacactagctgcacaatttcctggttcttgtgga
ttgaagtataggaaccctgatactggctctatgagaggtattcgcctttcagacggtcga
ctttatcctcctgatggtacttgggcacgtaatgtttacatagccgtcttccctaaagat
acaagaaaaaagacggaagaacttcctgatgcaagtatgtcattattgaatagaaagaaa
gagaaggttaaatgtagtgatttgattgtgttgggtttaccatggaagagtacagaagat
gatttacgcaaatattttgtacagtttggtgatttgctaatggtgcaggttaaaaaagat
attaaaacaggacattcaaagggttttggttttgtgaggtttgcagattatgatgcacaa
gttcagtgtatatctcagagacatatgatagatggtagatggtgtgatgtgagaattcca
aattcaaaagaaggaaaccataatctgatgaatcgtaaagtatttgttggaagatgtaca
gatgatatgactgctgaagatttacggtcatattttagtaaatttggtgaggtagtagat
gtttttataccaaagccatttagagcctttgcgtttgttactttttctgattcagacact
gctcaaacactgtgtggagaagatcatattatcaaaggagctagtgtacatattagtagt
gctgcacctaaaaacaatgaaaaa
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