KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_113626
Entry
LOTGIDRAFT_113626 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K23600  TAR DNA-binding protein 43
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOTGIDRAFT_113626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_113626
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     LOTGIDRAFT_113626
SSDB
Motif
Pfam: TDP43_N RRM_1 RRM_7 RL Nup35_RRM_2
Other DBs
NCBI-GeneID: 20230988
NCBI-ProteinID: XP_009049964
JGI: 113626
UniProt: V4AQH1
LinkDB
Position
Unknown
AA seq 268 aa
MNQYIQVAEEEGEEPMEVPSEDDGTLLLTTLAAQFPGSCGLKYRNPDTGSMRGIRLSDGR
LYPPDGTWARNVYIAVFPKDTRKKTEELPDASMSLLNRKKEKVKCSDLIVLGLPWKSTED
DLRKYFVQFGDLLMVQVKKDIKTGHSKGFGFVRFADYDAQVQCISQRHMIDGRWCDVRIP
NSKEGNHNLMNRKVFVGRCTDDMTAEDLRSYFSKFGEVVDVFIPKPFRAFAFVTFSDSDT
AQTLCGEDHIIKGASVHISSAAPKNNEK
NT seq 804 nt   +upstreamnt  +downstreamnt
atgaaccaatatattcaggtagctgaggaggaaggcgaggaacccatggaggttccaagc
gaagacgatggaacgctactcttgactacactagctgcacaatttcctggttcttgtgga
ttgaagtataggaaccctgatactggctctatgagaggtattcgcctttcagacggtcga
ctttatcctcctgatggtacttgggcacgtaatgtttacatagccgtcttccctaaagat
acaagaaaaaagacggaagaacttcctgatgcaagtatgtcattattgaatagaaagaaa
gagaaggttaaatgtagtgatttgattgtgttgggtttaccatggaagagtacagaagat
gatttacgcaaatattttgtacagtttggtgatttgctaatggtgcaggttaaaaaagat
attaaaacaggacattcaaagggttttggttttgtgaggtttgcagattatgatgcacaa
gttcagtgtatatctcagagacatatgatagatggtagatggtgtgatgtgagaattcca
aattcaaaagaaggaaaccataatctgatgaatcgtaaagtatttgttggaagatgtaca
gatgatatgactgctgaagatttacggtcatattttagtaaatttggtgaggtagtagat
gtttttataccaaagccatttagagcctttgcgtttgttactttttctgattcagacact
gctcaaacactgtgtggagaagatcatattatcaaaggagctagtgtacatattagtagt
gctgcacctaaaaacaatgaaaaa

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