Latilactobacillus graminis: LG542_04655
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Entry
LG542_04655 CDS
T06857
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lgm
Latilactobacillus graminis
Brite
KEGG Orthology (KO) [BR:
lgm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LG542_04655 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgm03021
]
LG542_04655 (rpoD)
Transcription machinery [BR:
lgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LG542_04655 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
QFP79565
UniProt:
A0A5J6Z578
LinkDB
All DBs
Position
932864..933973
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AA seq
369 aa
AA seq
DB search
MADNKKADTKKFDTAVKALIKAYKPKKEITNDELVAKIVKPFALKADEINDLMQKVEDQG
IGIVDKDGNPSVATLKKEKVSAKELKDMTAPTGIKINDPVRMYLKEIGRVALLNAQQEVD
LALKIEQGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDHRK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEI
GAEMDMNTDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEEHASYELLKEQ
LESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKQLKDFLE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctgataataaaaaagctgatacaaagaaatttgatactgcggtgaaggccttgatt
aaggcgtataaaccaaaaaaagaaatcaccaatgatgaactggttgcaaaaatcgtaaaa
ccatttgcactaaaagctgatgaaattaacgacttaatgcaaaaagtggaagatcaaggg
attgggattgttgataaagatggtaatcctagtgttgccacccttaagaaggaaaaagtt
tctgctaaagaattaaaagatatgacggcaccgactgggattaagattaacgatccagtc
cggatgtacttaaaggaaatcgggcgagttgcgcttttgaatgcccaacaagaagttgat
ttagctttaaaaattgaacaaggtgatcaagaagctaaacaacgtcttgccgaggctaac
ttacgattggtggtttcaattgctaaacgttacgttggtcgtgggatgcaatttttggat
ttaatccaagagggtaatatgggcttaatgaaagctgttgaaaaatttgatcaccgtaaa
gggtttaaattttcaacatatgccacttggtggattcgccaagcaattacgcgtgcaatt
gctgatcaagcccggacgattcggattccggttcatatggtagaaacaatcaacaagtta
atccggattcaacgtcaattactccaagatctaggtcgcgaaccaacgcctgaagaaatt
ggggcagagatggacatgaacactgacaaagtacgcgagattttgaaaattgctcaagaa
cctgtttcgcttgaaacgccaattggtgaagaggacgactcacacttaggcgactttatc
gaagaccaagatgcaactagtcctgaagaacatgcttcttatgaattgttaaaagaacaa
ttagaaagtgttctagacaccttaaccgaccgggaagaaaacgtcttacggttacgtttc
ggccttgatgatggtcggacacggacgttagaagaagtcggcaaggtctttggtgttacg
cgtgaacggattcgtcaaatcgaagcgaaagcattgcggaaactccgccacccatcacgt
tcaaaacaattaaaagactttttagaatag
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