Lactococcus garvieae ATCC 49156: LCGT_0526
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Entry
LCGT_0526 CDS
T01618
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCGT_0526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0526
Enzymes [BR:
lgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LCGT_0526
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCGT_0526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Alkyl_sulf_C
DUF3574
Motif
Other DBs
NCBI-ProteinID:
BAK58039
LinkDB
All DBs
Position
complement(541950..542810)
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AA seq
286 aa
AA seq
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MTYKFISWNIDSLNAALTGTSDRAALSMAVVEQLASAEADVIAIQETKLNGDLKKTNKVF
DVLASHFPDYEIVHRISTPPARKGYSGTMFLYKKSLPEPIITMPEIGAPEPMDSEGRIIT
LEFPEFFITTVYTPNAGDGLNRLDLRGQWDDQYRAYLQMLDLQKPVLACGDFNAAYNEID
LANPKGNRNSAGFTDQEREKFGLLLAAGFTDSFRKIHGNVESYYAPDRSIYTWFAQRSRT
AKINNSGWRIDYWLVSDRIAEQITRAEPLDSGARQDHVPIVLEINI
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaaatttatctcatggaatattgattcgttgaacgcagcattgacgggtact
agtgatcgtgcagctctttcgatggctgtggttgaacagcttgcctcagctgaagcagat
gttatcgctattcaagaaaccaagctcaatggcgacctcaaaaaaacaaacaaagtattc
gatgttttagctagccatttcccagactatgagattgttcatcgtatcagtacaccacct
gcacgtaaaggttactcaggaacgatgtttctttataagaaaagtttgcctgagccaatc
atcaccatgcctgaaatcggagcaccagagcccatggatagcgaaggtcgtatcatcacc
ttagaattccccgagtttttcatcacgacagtctacaccccaaatgcgggtgatggtctt
aatcgcttggatttacgtgggcagtgggatgatcaatatcgtgcctacttgcagatgctt
gacctccaaaaaccggtcttagcatgtggtgactttaatgctgcttacaatgagatagac
cttgccaaccctaaaggaaaccgtaattctgccggctttaccgatcaagaacgtgaaaaa
tttggtcttttattagccgctggatttacagatagtttccgtaaaattcacggcaacgta
gaaagttattacgcgccagaccgcagtatctacacatggtttgctcaacgttctcgtaca
gccaaaatcaataattctggctggagaatcgattattggcttgtttctgaccgtatagcc
gagcagattacacgcgcagaacccttggactcaggtgcccgtcaagatcacgtgcccatc
gttttagaaatcaatatctaa
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