Lysobacter gummosus: LG3211_0002
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Entry
LG3211_0002 CDS
T04163
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03030
DNA replication
lgu03430
Mismatch repair
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG3211_0002 (dnaN)
03430 Mismatch repair
LG3211_0002 (dnaN)
03440 Homologous recombination
LG3211_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_0002 (dnaN)
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG3211_0002 (dnaN)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG3211_0002 (dnaN)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG3211_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Amino_oxidase
DUF6212
YabP
DUF4139
Motif
Other DBs
NCBI-ProteinID:
ALN88992
LinkDB
All DBs
Position
2020..3120
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AA seq
366 aa
AA seq
DB search
MRFSLQREVFLKPLAQVVNVVERRQTLPVLANLLVQVKDGQLSLTGTDLEVEMISRVAVE
DAKDGETTIPARKLFEIIRALPDGSKVTVSQTAEKITVQAGRSRFTLASLPANDFPSIDE
VEATERVRVPEAALKELIERTAFAMAQQDVRYYLNGLLFDLRETSLRCVATDGHRLALCE
APFEGNAQAKRQIIVPRKGVQELQRLLEGGDREVELEMGRGHIRIKRDDVTFTSKLIDGR
FPDYEAVIPIGADKEVRIEREVLRASLQRAAILSNEKYRGVRIEVTPGQLKISAHNPEQE
EAQEEVEADTKVDDLAVGFNVNYLLDALTALRDEYVVIALRDANSSALVREASNERCRHV
VMPLRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagtctgcaacgcgaagtctttctcaagccgttggcccaagtggtcaatgtc
gtcgaacgccggcagaccttgccggtcctcgccaacctgctcgtacaggtcaaggacgga
cagctgtcgctgaccggtaccgatctggaagtcgagatgatttcccgcgttgcggtcgag
gatgcgaaggacggcgaaaccacgattccagcgcgcaagctgttcgaaatcattcgcgcc
ctgcccgacggcagcaaagtcacggtcagccagacggcggagaagatcactgtccaggcc
ggccgttcgcgcttcactctggccagcctgccggctaacgacttcccgtcgatcgacgaa
gtcgaagccaccgagcgcgtgcgggtgccggaagcggcgctgaaggaactgatcgaacgc
accgcgttcgcgatggcccagcaggacgtgcgctattacctcaacggtctgctgttcgac
ctgcgcgagaccagcctgcgctgcgtcgctaccgacggtcatcgcctggccctgtgcgag
gcgccgttcgaaggcaacgcccaggccaagcgccagatcatcgtgccgcgcaagggcgtg
caggaactgcagcgtctgctcgaaggcggcgatcgtgaggtcgagctcgaaatgggccgc
ggccacatccgcatcaagcgcgacgatgtcaccttcaccagcaagcttatcgacggccgc
ttccccgattacgaggcggtgattccgatcggcgccgacaaggaagtgcggatcgagcgc
gaagtgctgcgcgcctcgctgcagcgcgcggcgattctgtcgaacgagaagtaccgcggg
gttcgcatcgaagtcaccccgggccagctcaagatcagcgcgcacaaccccgagcaggaa
gaagcgcaggaagaagtcgaagccgacaccaaggtcgatgatctggccgtgggtttcaac
gtcaactacctgctcgacgccctgaccgccctgcgcgacgaatacgtggtcatcgccttg
cgcgacgccaactcgtcggcactggtgcgcgaggcctcgaacgagcgttgccgccatgtg
gtgatgccgctgcggctctga
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