Lysobacter gummosus: LG3211_0004
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Entry
LG3211_0004 CDS
T04163
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_0004 (gyrB)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LG3211_0004 (gyrB)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Topoisomerases
LG3211_0004 (gyrB)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LG3211_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALN88994
LinkDB
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Position
4971..7451
Genome browser
AA seq
826 aa
AA seq
DB search
MTNTEHDPSQDPTAEPSTPQPPQNQTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHH
MVFEVVDNAIDEALAGHADDVIVTLHDDGSVSCFDNGRGIPVDIHKEEGVSAAEVILTVL
HAGGKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGHHHQQEYALGEPLYPLKQIE
DSPKRGTLLRFKPAVEIFSDVEFHYDILAKRLRELSFLNSGVKITLIDERGEGRRDLFQY
EGGIRSFVEHLAQVKTPLHPNVISVSGEQNGITVDVALQWTDSYQETMFCFTNNIPQKDG
GTHLIGFRAALTRTLTNYIENSGIAKQAKVALSGDDMREGMIAVLSVKVPDPSFSSQTKE
KLVSSEVRPVVESTFGARLEEFLQEHPNEARAITGKIIDAARAREAARKARDLTRRKGAL
DIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVERARF
DRMLGSAEVGTLITALGTGIGKDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQM
PELIERGHIYIGLPPLYKIKQGKNEIYLKDDAALDQYLANNAVEGASLVPAAGELPIEGA
ALEKLLLAYAGARETIARNAHRYDPNVLQALIDFTPLDTAHLLANIDERHELDALEKRLN
QTGLGKPRYSLQLHPANETRQAALLVTRAHMGQTLVQVLPLSAFEGGELRSLREAAALLH
GLVREGAQIIRGNRAQAVTSFAQAQAWLLEEAKKGRAIQRFKGLGEMNPEQLWDTTVNPE
TRRLLQVRIEDAVAADQIFSTLMGDVVEPRREFIEDNALKVANLDV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaccgagcacgacccctcgcaagacccgaccgccgagccgtccacgccgcag
cccccgcaaaaccagacctacgactccagcaagatcaccgtcttgcgcggactcgaggcc
gtgcgcaagcgcccgggcatgtacatcggcgacgtccacgacggcaccggcttgcaccac
atggtgttcgaggtggtcgacaacgcgatcgacgaagccctcgccggccacgccgacgat
gtgatcgtgaccctgcacgacgacggttcggtttcctgcttcgacaacggccgcggcatt
ccggtggacatccacaaggaagaaggcgtgtcggcggccgaggtgatcctcaccgtgctc
cacgcgggcggtaagttcgacgacaacagctacaaggtttccggcggtctgcacggcgtg
ggcgtgtcagtggtcaacgcgctgtccgagcacctgtggctggacatctggcgcgacggt
caccaccaccagcaggaatatgcgctgggcgagccgctgtacccgctcaagcagatcgag
gattcgcccaagcgcggcaccctgctgcgcttcaagccggcggtggaaatcttcagcgac
gtcgaattccattacgacatcctggccaagcgcctgcgcgaactgtcgttcctcaattcc
ggcgtcaagatcaccctgatcgacgagcgcggcgaaggccggcgcgacctgttccagtac
gagggcggtatccgctccttcgtcgagcatctggcccaggtcaagacgccgctgcacccg
aacgtgatctcggtgtcgggcgagcagaacggcatcaccgtggacgtggcgctgcagtgg
accgattcctatcaggaaacgatgttctgcttcactaacaacatcccgcagaaagacggc
ggcacccacctgatcggtttccgcgccgcgctgacccgcacgctgaccaactacatcgaa
aacagcggcatcgccaagcaggccaaggtggcgctgtcgggcgacgacatgcgcgaaggc
atgatcgcggtgctgtcggtgaaggtgccggaccccagcttttcctcgcagaccaaggaa
aaactggtcagttccgaggttcgcccggtcgttgagagcacgttcggtgcacgtttggag
gagttcctccaagaacaccccaacgaagcccgcgccatcaccggcaagatcatcgacgcc
gcccgtgcccgcgaagccgcgcgcaaggcccgcgacctgacccgccgcaagggcgcgctg
gatatcgccggcctgcccggcaagctcgccgactgccaggagaaagatccggcgctcagc
gaactgttcatcgtcgagggcgactcggcaggcggctcggccaagcagggccgcaaccgc
aagacgcaggcgatcctgccgctcaagggcaagatcctcaacgtcgagcgcgcgcgcttc
gaccgcatgctcggcagcgccgaagtcggcacgctgatcaccgcgctcggcaccggcatc
ggcaaggacgagtacaacccggacaagctgcgctatcaccgcatcatcctgatgaccgac
gccgacgtcgacggctcgcatatccgcaccttgctgctgacgttcttctaccggcagatg
ccggagctgatcgagcgcgggcacatctacatcggcttgccgccgctgtacaaaatcaag
cagggcaagaacgagatctatctcaaggacgacgcggcgctggaccagtacctggccaac
aacgcggtcgaaggcgcgtcgctggttccggcggccggcgagttgccgatcgaaggcgcg
gcgctggagaagttgttgctggcctatgccggcgcgcgcgagaccatcgcccgcaacgcg
catcgttacgatcccaacgtgctgcaggcgctgatcgatttcaccccgctcgacaccgcg
cacctgctcgccaacatcgacgagcgccacgaactcgacgcgctcgaaaagcgcctcaac
cagaccgggctcggcaagccgcgttattcgctgcaactgcatccggccaacgaaacccgt
caggccgcgttgctggtcacgcgcgcgcacatgggccagaccctggtgcaggtgctgccg
ctgtcggcgttcgaaggcggcgagctgcgttcgctgcgcgaagcggcggcgctgctgcac
ggactggtgcgcgaaggcgcgcagatcatccgcggcaatcgcgcccaggcggtgacgagt
ttcgcccaggcgcaggcgtggttgctcgaggaagccaagaagggccgcgcgatccagcgc
ttcaagggcctgggcgaaatgaatcccgagcagctgtgggacaccacggtcaatccggaa
acgcggcgcctgctgcaggtgcgcatcgaagacgccgtcgccgccgatcagatcttcagc
accttgatgggcgacgtggtcgaaccgcgccgcgagttcatcgaggataacgcgctgaag
gtggccaatctcgacgtgtga
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