Lysobacter gummosus: LG3211_3266
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Entry
LG3211_3266 CDS
T04163
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lgu
Lysobacter gummosus
Pathway
lgu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG3211_3266 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3266 (uvrA)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG3211_3266 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG3211_3266 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
RsgA_GTPase
AAA_25
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_21
Viral_helicase1
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
ALN92220
LinkDB
All DBs
Position
3626479..3629403
Genome browser
AA seq
974 aa
AA seq
DB search
MALDYIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGSP
RCPDHHYPLEAQTVSQMVDQAIALDPEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGQLYEIDAVPPLALRVKHTIEAVVDRFRPRDDIKQRLAESFETALKLGDGMAQVQSLD
NAETAPLLFSSKYSCPVCDYSLPELEPRLFSFNSPVGACPTCDGLGVAEFFDPARVVVHP
ELSLSAGAVRGWDRRNAYYFQLIQSLAKHYKFNVDTPWQSLTAAQQQAVLYGSGDEQISF
NYITENGGRSQRKHRFEGIVPNLERRYRETESAAVREELAKFISQRPCPDCGGARLNRAA
RNVFVAERPLPDLVVLPVDEALNFFKGLELPGWRGEIAIKIVKEIVDRLRFLVDVGLDYL
TLERKADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAMRLADYIVDIGPGAGVHGGEIVAQGHFADILKAPRSLTGQYLSGKRKI
EIPKTRHKPNPKTTLHLRGASGNNLKDVDLHIPAGLLTCVTGVSGSGKSTLINDTLYVIA
ANELNGASQTPAPYKSVENIELFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEVL
YKGYNINDVLSMTVEAALSLFEAVPTIARKLETLMDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEHLLAVLHRLRDDGNTVVVIEHNLDVIKTAD
WVIDLGPEGGHRGGTILATGTPEDIAALPHSHTGHFLAPLLGTPKKAKPAEPAKKKPAAK
SDAPAARAKKKSAA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggactacatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgat
ctcgatctgccgcgcgacaagctgatcgtgatcaccggactgtccggctcgggcaagtcc
tcgctggctttcgacaccatttacgccgaaggccagcgccgctacgtcgaatcgctgtcg
gcctacgcgcggcagttcctgtcggtgatggaaaagcccgatgtggaccacatcgaaggc
ctctcgccggcgatttcgatcgagcagaaatccacctcgcacaacccgcgttcgaccgtc
ggcacgatcaccgaggtctacgactacctgcgcctgctgtacgcacgcgtcggctcgccg
cgctgcccggatcaccactatccgctggaagcgcagaccgtcagccagatggtcgatcag
gccatcgcgctggatcctgagcagcgctacatgctgcttgcgccggtcatccgcgaacgc
aagggcgagcacgcgcaagtgttcgagcaactgcgcgcgcagggcttcgtgcgcgtgcgc
gtggacggccagttgtacgagatcgacgcggtgccgccgctggccttgcgcgtcaagcac
accatcgaggcggtggtcgaccgcttccgcccgcgcgacgacatcaagcagcgcctggcc
gagtcgttcgaaaccgcgctcaagctcggcgacggcatggcccaggtgcagtcgctggac
aacgccgagaccgcgccgctgctgttctcgtccaagtacagctgcccggtctgcgattat
tcgctgcccgaactcgagccgcggctgttctcgttcaattcgccggtcggcgcctgcccg
acctgcgacggcctgggcgtggcggaattcttcgatcccgcgcgcgtggtcgtgcacccg
gagctgtcgctctcggccggcgcggtgcgcggctgggaccgccgcaacgcctactacttc
cagttgatccagtcgctggccaagcactacaagttcaacgtcgatacgccgtggcagtcg
ctgaccgcggcccagcaacaggcggtgctgtacggcagcggcgatgagcagatcagcttc
aactacatcaccgagaacggcggccgcagccagcgcaagcatcgcttcgaaggcatcgtg
ccgaacctggagcgccgttaccgcgagaccgaatcggcggcggtgcgcgaggaactggcc
aagttcatcagccagcgtccctgccccgactgcggcggcgcgcgcctcaaccgcgccgcg
cgcaacgtgttcgtcgccgagcgtccgctgccggacctggtggtgctgccggtcgatgaa
gcgctgaatttcttcaagggcctggaactgccgggctggcgcggcgagatcgcgatcaag
atcgtcaaggagatcgtcgatcgcctgcgcttcctggtcgatgtcggcctggattacctc
accctggaacgcaaggccgactcgctgtcgggcggcgaagcccagcgcatccgtctggcc
agccagatcggcgccggactggtcggggtgatgtacgtgctcgatgagccgtcgatcggc
ctgcatcagcgcgacaacgagcgcctgctcggcacgctgacgcgcctgcgcgatctgggc
aacaccgtgatcgtggtcgaacacgacgaagacgcgatgcgcttggccgactacatcgtc
gatatcggccccggcgccggcgtgcacggcggcgagatcgtcgcccagggccacttcgcc
gacatcctgaaagcgccgcgttcgctgaccggccaatacctcagcggcaagcgcaagatc
gaaatccccaagacccggcacaaaccgaacccgaagaccaccctgcatctgcgcggcgcc
agcggcaacaacctcaaggatgtcgatctgcacatccccgcgggcctgttgacctgcgtc
accggcgtgtcgggctcgggcaagtccacgctgatcaacgacacgctgtacgtgatcgcc
gccaacgagttgaacggcgcttcgcaaaccccggcgccgtacaagtcggtggagaacatc
gagctgttcgacaaggtcgtggacatcgaccagtcgccgatcgggcgcacgccgcgctcc
aatccggccacctacaccggtctgttcacgccgctgcgcgagctgttcgcgcaggtgccc
gaagcgcgcgcgcgcggctattcgccgggccgtttcagcttcaacgtgcgcggcggccgc
tgcgaggcctgccagggcgacggcctgatcaaggtcgagatgcacttcctgccggacgtg
tacgtgccttgcgacgtctgccacggcaagcgctacaaccgcgagacgctggaggtgttg
tacaagggctacaacatcaacgacgtgctgtcgatgacggtggaggcggcgctgagcctg
ttcgaggcggtaccgaccatcgcgcgcaaactcgaaacgctgatggacgtgggcctgagc
tacatcaagctgggccagagcgcgaccacgctttcgggcggcgaagcgcagcgcgtgaag
ctgtcgaaggaactctcgcgccgcgataccgggcgcacgctgtacatcctcgacgagccg
accacgggcctgcatttccacgacatcgaacacctgctcgcggtcctgcaccgcctgcgc
gacgacggcaacacggtggtggtgatcgagcacaacctcgacgtgatcaagaccgccgac
tgggtcatcgatctgggtccggaaggcggccatcgcggcggcaccatcctcgccaccggc
acgccggaagacatcgccgcgctgccgcattcgcataccggccacttcctcgcaccgctg
ctgggcacgccgaagaaggccaagcccgctgagccggcgaagaagaaaccggcggcgaaa
tccgacgcgccggccgcgcgcgccaagaagaagtccgctgcatga
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