KEGG   Lysobacter gummosus: LG3211_3266
Entry
LG3211_3266       CDS       T04163                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lgu  Lysobacter gummosus
Pathway
lgu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LG3211_3266 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgu03400]
    LG3211_3266 (uvrA)
DNA repair and recombination proteins [BR:lgu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LG3211_3266 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LG3211_3266 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 RsgA_GTPase AAA_25 nSTAND1 DnaJ_CXXCXGXG nSTAND3 AAA_21 Viral_helicase1 NACHT cobW
Other DBs
NCBI-ProteinID: ALN92220
LinkDB
Position
3626479..3629403
AA seq 974 aa
MALDYIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGSP
RCPDHHYPLEAQTVSQMVDQAIALDPEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGQLYEIDAVPPLALRVKHTIEAVVDRFRPRDDIKQRLAESFETALKLGDGMAQVQSLD
NAETAPLLFSSKYSCPVCDYSLPELEPRLFSFNSPVGACPTCDGLGVAEFFDPARVVVHP
ELSLSAGAVRGWDRRNAYYFQLIQSLAKHYKFNVDTPWQSLTAAQQQAVLYGSGDEQISF
NYITENGGRSQRKHRFEGIVPNLERRYRETESAAVREELAKFISQRPCPDCGGARLNRAA
RNVFVAERPLPDLVVLPVDEALNFFKGLELPGWRGEIAIKIVKEIVDRLRFLVDVGLDYL
TLERKADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAMRLADYIVDIGPGAGVHGGEIVAQGHFADILKAPRSLTGQYLSGKRKI
EIPKTRHKPNPKTTLHLRGASGNNLKDVDLHIPAGLLTCVTGVSGSGKSTLINDTLYVIA
ANELNGASQTPAPYKSVENIELFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEVL
YKGYNINDVLSMTVEAALSLFEAVPTIARKLETLMDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEHLLAVLHRLRDDGNTVVVIEHNLDVIKTAD
WVIDLGPEGGHRGGTILATGTPEDIAALPHSHTGHFLAPLLGTPKKAKPAEPAKKKPAAK
SDAPAARAKKKSAA
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggcgctggactacatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgat
ctcgatctgccgcgcgacaagctgatcgtgatcaccggactgtccggctcgggcaagtcc
tcgctggctttcgacaccatttacgccgaaggccagcgccgctacgtcgaatcgctgtcg
gcctacgcgcggcagttcctgtcggtgatggaaaagcccgatgtggaccacatcgaaggc
ctctcgccggcgatttcgatcgagcagaaatccacctcgcacaacccgcgttcgaccgtc
ggcacgatcaccgaggtctacgactacctgcgcctgctgtacgcacgcgtcggctcgccg
cgctgcccggatcaccactatccgctggaagcgcagaccgtcagccagatggtcgatcag
gccatcgcgctggatcctgagcagcgctacatgctgcttgcgccggtcatccgcgaacgc
aagggcgagcacgcgcaagtgttcgagcaactgcgcgcgcagggcttcgtgcgcgtgcgc
gtggacggccagttgtacgagatcgacgcggtgccgccgctggccttgcgcgtcaagcac
accatcgaggcggtggtcgaccgcttccgcccgcgcgacgacatcaagcagcgcctggcc
gagtcgttcgaaaccgcgctcaagctcggcgacggcatggcccaggtgcagtcgctggac
aacgccgagaccgcgccgctgctgttctcgtccaagtacagctgcccggtctgcgattat
tcgctgcccgaactcgagccgcggctgttctcgttcaattcgccggtcggcgcctgcccg
acctgcgacggcctgggcgtggcggaattcttcgatcccgcgcgcgtggtcgtgcacccg
gagctgtcgctctcggccggcgcggtgcgcggctgggaccgccgcaacgcctactacttc
cagttgatccagtcgctggccaagcactacaagttcaacgtcgatacgccgtggcagtcg
ctgaccgcggcccagcaacaggcggtgctgtacggcagcggcgatgagcagatcagcttc
aactacatcaccgagaacggcggccgcagccagcgcaagcatcgcttcgaaggcatcgtg
ccgaacctggagcgccgttaccgcgagaccgaatcggcggcggtgcgcgaggaactggcc
aagttcatcagccagcgtccctgccccgactgcggcggcgcgcgcctcaaccgcgccgcg
cgcaacgtgttcgtcgccgagcgtccgctgccggacctggtggtgctgccggtcgatgaa
gcgctgaatttcttcaagggcctggaactgccgggctggcgcggcgagatcgcgatcaag
atcgtcaaggagatcgtcgatcgcctgcgcttcctggtcgatgtcggcctggattacctc
accctggaacgcaaggccgactcgctgtcgggcggcgaagcccagcgcatccgtctggcc
agccagatcggcgccggactggtcggggtgatgtacgtgctcgatgagccgtcgatcggc
ctgcatcagcgcgacaacgagcgcctgctcggcacgctgacgcgcctgcgcgatctgggc
aacaccgtgatcgtggtcgaacacgacgaagacgcgatgcgcttggccgactacatcgtc
gatatcggccccggcgccggcgtgcacggcggcgagatcgtcgcccagggccacttcgcc
gacatcctgaaagcgccgcgttcgctgaccggccaatacctcagcggcaagcgcaagatc
gaaatccccaagacccggcacaaaccgaacccgaagaccaccctgcatctgcgcggcgcc
agcggcaacaacctcaaggatgtcgatctgcacatccccgcgggcctgttgacctgcgtc
accggcgtgtcgggctcgggcaagtccacgctgatcaacgacacgctgtacgtgatcgcc
gccaacgagttgaacggcgcttcgcaaaccccggcgccgtacaagtcggtggagaacatc
gagctgttcgacaaggtcgtggacatcgaccagtcgccgatcgggcgcacgccgcgctcc
aatccggccacctacaccggtctgttcacgccgctgcgcgagctgttcgcgcaggtgccc
gaagcgcgcgcgcgcggctattcgccgggccgtttcagcttcaacgtgcgcggcggccgc
tgcgaggcctgccagggcgacggcctgatcaaggtcgagatgcacttcctgccggacgtg
tacgtgccttgcgacgtctgccacggcaagcgctacaaccgcgagacgctggaggtgttg
tacaagggctacaacatcaacgacgtgctgtcgatgacggtggaggcggcgctgagcctg
ttcgaggcggtaccgaccatcgcgcgcaaactcgaaacgctgatggacgtgggcctgagc
tacatcaagctgggccagagcgcgaccacgctttcgggcggcgaagcgcagcgcgtgaag
ctgtcgaaggaactctcgcgccgcgataccgggcgcacgctgtacatcctcgacgagccg
accacgggcctgcatttccacgacatcgaacacctgctcgcggtcctgcaccgcctgcgc
gacgacggcaacacggtggtggtgatcgagcacaacctcgacgtgatcaagaccgccgac
tgggtcatcgatctgggtccggaaggcggccatcgcggcggcaccatcctcgccaccggc
acgccggaagacatcgccgcgctgccgcattcgcataccggccacttcctcgcaccgctg
ctgggcacgccgaagaaggccaagcccgctgagccggcgaagaagaaaccggcggcgaaa
tccgacgcgccggccgcgcgcgccaagaagaagtccgctgcatga

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