Lysobacter gummosus: LG3211_3361
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Entry
LG3211_3361 CDS
T04163
Name
(GenBank) bacterial DNA-binding family protein
KO
K03530
DNA-binding protein HU-beta
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_3361
03036 Chromosome and associated proteins [BR:
lgu03036
]
LG3211_3361
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3361
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LG3211_3361
Chromosome and associated proteins [BR:
lgu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LG3211_3361
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LG3211_3361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ALN92312
LinkDB
All DBs
Position
complement(3729409..3729681)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELVGAVAETAELSKTDATAAVDALIDVVTKALKKGDTVTLVGFGTFQVRKRAARQG
RNPKTGETIKIAASKNPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggccgaactcgtaggcgccgtcgccgaaaccgccgagctgtcgaagaccgac
gctaccgccgccgtcgatgcgctgatcgacgtcgtcaccaaggcgctcaagaagggcgac
acagtcacgctcgtaggcttcggcaccttccaggtgcgcaagcgcgccgcccgccagggc
cgtaacccgaagaccggcgaaacgatcaagatcgcggcctcgaagaatccctccttcaag
gctggcaaggcgctgaaggatgctgtaaactga
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