Lactococcus garvieae Lg2: LCGL_0479
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Entry
LCGL_0479 CDS
T01963
Name
(GenBank) uracil-DNA glycosilase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lgv
Lactococcus garvieae Lg2
Pathway
lgv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCGL_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgv03400
]
LCGL_0479
Enzymes [BR:
lgv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCGL_0479
DNA repair and recombination proteins [BR:
lgv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCGL_0479
Prokaryotic type
LCGL_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF7187
Motif
Other DBs
NCBI-ProteinID:
BAK59939
UniProt:
F9VC88
LinkDB
All DBs
Position
492521..493180
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AA seq
219 aa
AA seq
DB search
MKKTDWSGPLRERLPQEYFSDLVDFINEVYAKGNVYPPEDKIFRAIELTALSDVKVILVG
QDPYPQPGKAQGLSFSYPASFVVNRPDSIVNIRKELQSEGFDKKDSDLTHWAEQGVLLLN
AVLTVPEMKCNAHKGKIWEPLTDEIIKIASDDARPKVFLLWGGDARKKAKLIDSSKHLVL
ESAHPSPLSASRGFFGSQPFSKANAFLEKTGQKGIDWSK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagattggagtggccctttaagagaacgattgcctcaagaatacttttca
gatctcgttgattttattaatgaagtttatgctaaaggtaatgtttatccacctgaggat
aaaatatttcgggcgattgaattgaccgccttgtctgatgttaaagttatactggttggg
caggatccttatccacagccaggcaaagcccaagggcttagtttttcctatcctgcttcc
tttgtggtgaatcggccagactctattgttaatattcggaaagaactccaaagcgaaggc
tttgataaaaaggattcagatttaacacattgggctgagcaaggggttttattgctcaat
gctgtacttaccgtccccgagatgaagtgtaatgcgcataaaggaaaaatctgggaaccc
ttgacagatgagataataaaaattgcttcggatgacgcacgcccaaaagtctttctctta
tggggcggtgatgcgcgtaagaaagcaaagctgattgattcttctaagcatttagtactc
gagtctgcacatccttcgcctctttctgcctctcgtggcttctttggctcacagcctttt
tcgaaagccaatgcctttttagaaaaaacaggacaaaaagggatagattggtcaaaataa
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