Legionella hackeliae: LHA_0332
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Entry
LHA_0332 CDS
T03809
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lha
Legionella hackeliae
Pathway
lha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHA_0332 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lha03021
]
LHA_0332 (rpoB)
03400 DNA repair and recombination proteins [BR:
lha03400
]
LHA_0332 (rpoB)
Enzymes [BR:
lha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LHA_0332 (rpoB)
Transcription machinery [BR:
lha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHA_0332 (rpoB)
DNA repair and recombination proteins [BR:
lha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHA_0332 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
DUF6497
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
CEK09436
UniProt:
A0A0A8UPH4
LinkDB
All DBs
Position
I:323698..327801
Genome browser
AA seq
1367 aa
AA seq
DB search
MAIAEAKPQYSHAEKKRFRKSFGRQADKMEIPNLLEIQLKSYRDFLETDPNGNGQKTGLH
AAFSSVFPIESFSGNARLEYVSYKLGEPAFDVRECKLRGLTYSAPLRVKIRLVVLDKDAA
GEPKPIKDIREQDVFMGEIPLMTDVGTFVVNGTERVVVSQLHRSPGVIFEHDRGKTHSSG
KLLYSARIIPYRGSWLDFEFDPKDCVFVRIDRRRKLPVTILLRALGYETEDVLAQFFETT
VCQLRNGEFHINLIPARLRGEIASFDIVVPETGELIVEQGRRITARHIKMMEKSNMQDLV
VPRDYLIGKVLAKNIINTETGEVLAQANDEVSAELLDQLADNGILNFEMIYTNDLDHGSY
ISDTLRIDPTTSQLEALVEIYRMMRPGEPPTKEAAEALFKNLFFAEDRYDLSAVGRMKFN
RRVGRKEDTGPGTLAKEDILAVIKTLIDIRNGIGMVDDIDHLGNRRVRSVGEMAENQFRV
GLVRVERAVKERLSLVESENLMPQDLINAKPVSAAVKEFFGSSQLSQFMDQVNPLSGVTH
KRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGF
IETPCRKVIDGRVTDDIEYLSAIEEVDQYIAQSNVPVDAKGNILADLVPCRHQNEFSLTT
PDKINYMDVSPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSEKPLVGTGMER
TVASDSGVSVVARRGGVIDLVDASRIVVRVNDDETTAGEAGVDIYNLTKYFRSNQDTCIN
QRPIVSTGDRIQRGDILADGPCTDMGELALGQNLLVAFMPWNGYNFEDSILISERIVQED
RFTTIHIEELTCIARDTKLGTEEITADIPNVGESALASLDESGVVYIGAEVSAGDILVGK
VTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPSGMNGTVIDVQIFTRDGLEKDERAK
SIEEEHLARVRKDLIDERRIREEDIYHRVSNLLLDKVATGGPNSIKPGSKVTSDYLDKVN
REKWFDIRVDDEGTSQQLEQLSKQMELLGKEMEKRFNDSRKKIVQGDDLAPGVLKIVKVY
LAVKRRIQPGDKMAGRHGNKGVISIVVPVEDMPHMADGTAVDIVLNPLGVPSRMNIGQVL
ETHLGLAAKGLGQRIADLIDSQHSVAEVRSYLDKIYNHDGQKRIHLNSLADEEVMILADN
LRAGVPMATPVFDGASEKEIKAMLELAGLRPDGKTTLYDGRTGKQFDNPVTVGYMYMLKL
NHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKS
DDVGGRTKIYKNIVDGDHRMDPGMPESFNVLLKEIRALGIDIELEHD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgcagaagctaaacctcaatattcacatgctgagaaaaaacgatttcgcaaa
agctttggtaggcaggcagataaaatggaaattccaaatctgcttgaaatccagctaaaa
tcgtatcgcgattttttagaaaccgatcctaatggaaacggacagaaaacaggtttacat
gctgcgttctcatcagtattccctatagaaagcttttctggaaatgccagactcgaatat
gtgagctataagcttggtgagccagcgtttgatgtacgtgagtgcaaactcagaggatta
acatattctgcaccactgcgtgtaaaaattcgtctggttgttctagacaaagacgcagca
ggtgaacccaaaccaattaaagatatccgtgaacaagacgtattcatgggtgaaattcct
ttaatgactgacgtaggtaccttcgtcgtcaatggaaccgaacgtgttgttgtttctcaa
ttacatcgttctccaggcgtaattttcgaacatgatcgtggtaaaacacattcttccgga
aaactgctatattcagctcgtattattccgtatcgtgggtcatggcttgattttgaattc
gatccaaaagattgtgtgtttgttagaatagatagacgccgcaagttacccgtaactatt
ttattgcgtgctcttggttatgaaactgaagatgttttggctcaattttttgaaacaact
gtttgtcaattaagaaatggtgagtttcatattaaccttatacccgcaagattgcgtggt
gaaattgcatcctttgatattgttgttcctgaaactggtgagttaattgttgaacaaggc
cgacgcataactgcacgtcatattaaaatgatggaaaaaagcaatatgcaagatctggtc
gttccaagagattatctgattggtaaagtacttgctaaaaatatcattaatactgaaaca
ggcgaagttttagcacaggctaatgatgaagtaagtgctgagttactcgatcaactcgct
gataatggtatcctcaactttgagatgatttataccaatgatctagatcatggctcatat
atttctgatacgctcagaatcgacccaaccactagccaattagaagcattggttgaaata
taccgtatgatgcgtccgggggaaccacccactaaagaagctgcagaagcattatttaag
aatttattctttgctgaagatcgctatgatctttctgcagttggtcgtatgaaatttaac
cgtcgtgttggtagaaaagaagatactggtcctggaacattagcaaaagaagatattctc
gctgttattaaaactcttattgatatacgtaatggtatcggtatggtcgatgatattgat
catttaggtaaccgtcgtgtaagaagcgttggcgagatggctgaaaaccaattccgcgtt
ggtcttgttcgcgttgagcgagctgttaaagagcgtttaagtttggttgagtctgaaaac
ttaatgccacaagatttaattaacgcaaaaccagtttcggctgcggtgaaagaattcttc
ggctcaagccaattgtcacaatttatggatcaagtaaatccactatccggggtaactcat
aaacgtcgtgtttcagcgcttggcccaggtggtttaactagagagcgtgcaggttttgag
gtgcgtgacgtacatactactcactatggtcgtgtttgcccaattgaaacgcctgaaggt
ccaaatattggattgattaactcactctcagtatatgccagaactaatgattatggtttt
attgagactccttgccgtaaggtaattgacggtcgtgtaactgacgatattgaatacctt
tctgctattgaagaagtcgatcaatacattgcgcagtctaatgttccagttgatgcaaaa
ggcaatattctagcggacttggtaccttgcagacatcagaatgagttttctttaacaact
cctgataaaattaactatatggacgtttctccgaagcagatcgtttctgttgctgcttct
ttgattcctttccttgaacatgatgatgctaaccgtgcactcatgggctctaacatgcaa
cgtcaagcagtaccaacgttgcgttctgaaaagccactagttggaacaggtatggaacgt
actgttgcttcggattctggagtatcagtagtcgcgagacgtggtggagtcattgattta
gttgatgcttctcgtatcgttgtacgtgttaatgatgatgaaactacagcgggtgaagca
ggggttgatatttacaacctaacgaaatacttccgttcaaaccaagacacatgtatcaac
caacgtcctatcgtttctacaggtgatcgtattcagcgaggagatattttggctgatgga
ccttgcaccgatatgggagagttagcattaggacaaaatctcttagtcgcattcatgcct
tggaatggttacaactttgaggactctattcttatttctgagcgtattgttcaagaagat
agatttactactattcatattgaagagttaacttgtattgctcgagatacaaaacttggt
actgaagaaatcactgcagatattcctaatgtgggcgaatcagcattggcaagtttagac
gagtcaggtgttgtatatatcggtgctgaagttagtgccggtgatattttggtgggtaaa
gtaacaccaaaaggagaaactcaactaacgcctgaggaaaaattattaagagcaatattt
ggtgagaaagcatctgatgttaaggattcttctttacgcgttccttctggaatgaatggt
accgtaatcgatgtacaaatatttactcgtgatggtcttgagaaagatgagcgtgctaaa
agtattgaagaggagcacttagctcgtgttcgtaaagacttaattgatgaaagacgtatc
cgtgaagaagatatttatcaccgtgtaagtaatttactcttggataaagtggctactggt
ggaccaaacagcattaaaccaggttcaaaagtaacctctgattatttagataaagtaaat
agagaaaaatggtttgatatccgtgtggatgatgaaggaacaagccaacaattagaacag
ctttccaaacaaatggaattacttggaaaagaaatggaaaagcgttttaatgatagtcgt
aagaaaattgttcaaggtgatgatttagcgcctggcgtacttaagattgttaaagtttac
ttggccgttaaacgtcgtattcaacctggcgataaaatggcaggtcgtcacggaaacaaa
ggggttatctctattgttgttcctgtggaagatatgccacacatggctgatggaaccgct
gtcgatatcgtgttaaatcctcttggtgttccttcacgtatgaacatcggacaggtcctg
gaaacccatttgggattagctgctaaaggtcttggtcaaagaatagctgatcttattgat
tctcaacattctgtggcagaggtcagatcatatctggataaaatctataatcatgacggg
caaaagcgaattcacttaaatagcctggctgatgaggaggtcatgatattggctgacaac
ctacgtgctggtgttcctatggctacgcctgtgtttgatggggctagtgaaaaagaaatt
aaggcaatgctggagttagcaggcttacgtccagatggtaaaacaacgttgtatgatggc
agaactggtaagcaatttgataatccagtaactgttggctatatgtatatgcttaagctt
aatcatttagttgatgataagatgcacgcccgttctacaggatcatatagcttggtaaca
cagcaaccactaggcggtaaggcacaatttggtggccagcgctttggggagatggaagtg
tgggcgttagaggcgtatggtgctgcctatacgttgcaagagatgttaacagttaaatca
gatgatgtcggaggacgcacgaagatttataaaaatatagttgatggtgaccatcgtatg
gatcctggtatgcctgaatcattcaatgttttattgaaagaaataagagcattaggtatc
gatatcgaactggaacatgactaa
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