Lactobacillus helveticus H9: LBH_1130
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Entry
LBH_1130 CDS
T03040
Name
(GenBank) Uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBH_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_1130
Enzymes [BR:
lhh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LBH_1130
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBH_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHI12124
LinkDB
All DBs
Position
complement(1185978..1186460)
Genome browser
AA seq
160 aa
AA seq
DB search
MDKSLKQIGLSRDQVYITSAVRSRPFSVKKVFSKRENKEVIKRPNRKPTKKEVLAHAPFL
DYEISYADPQIIVALGNTGLERLLGPGHKISAEHGKVIDNTPILELNTAKDGYVWSKKKY
TVIPEYHPAAVFYNRKLSDDIVKDWEVIKPYIDKERESNE
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
ttggataaatccttgaagcaaattggtttatcacgagatcaggtttatatcactagtgcg
gttcgtagccgtccatttagcgtgaaaaaagttttcagcaaacgagaaaataaagaggta
attaaaagacctaatcgtaaaccaactaaaaaagaagtactcgcgcatgcaccatttctt
gattatgaaatatcttatgcggatcctcagattattgttgctttaggaaacactggctta
gaacgattacttggtccaggtcacaaaatttcggctgaacatggcaaagttattgacaac
acaccaatccttgaacttaatacagctaaagatggctatgtttggtcaaaaaagaagtac
acggtcattccggaatatcaccctgcagcagttttttataatcgtaaattaagcgatgat
attgtaaaagattgggaagtaataaaaccttatatcgataaagaaagggaaagcaatgag
taa
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