KEGG   Lactobacillus helveticus H9: LBH_1353
Entry
LBH_1353          CDS       T03040                                 
Name
(GenBank) CRISPR-associated protein cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
lhh  Lactobacillus helveticus H9
Brite
KEGG Orthology (KO) [BR:lhh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhh03400]
    LBH_1353
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lhh02048]
    LBH_1353
DNA repair and recombination proteins [BR:lhh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LBH_1353
Prokaryotic defense system [BR:lhh02048]
 CRISPR-Cas system
  Universal Cas proteins
   LBH_1353
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AHI12339
LinkDB
Position
complement(1425262..1426251)
AA seq 329 aa
MEDYYLFSSGELERKDNTVRLTRSDGKYKDLKIEVTRDIYLFGEVSTNTKCLNYLAQMKI
PVHFFNYYGFYTGSFYPKEQNVSGTLLIQQVQAYTDPKRRLYYAKKFVLGAAKNLLRNLK
YYQRRGRNLDDSIKEITSLIRQIDQVHDVEELMGVEGTIHRRYYASWQSVFIPDVDFSKR
VRRPPDNMVNTLISFLNGLMYTTCLSEIYVTQLNPTISYLHSPMDRRFSLCLDISEIFKP
MIVDRLIFSLINKNMISEEDFNKESNYCYLSEKSKRIIVSEYDKYMKQKVRYKTLHRDVS
YRHLIRLECYKLVRSLVEGETYEPYVMGW
NT seq 990 nt   +upstreamnt  +downstreamnt
atggaagattattatttattttcttcaggagaattagaacgtaaagataatacggttaga
ttaacaaggtcagatggtaagtataaagatttaaagattgaagttaccagagatatttat
ttgtttggcgaggtttctactaatactaagtgcttaaattatcttgctcaaatgaaaata
ccggttcatttttttaattactatggtttttatactggatcattttatccaaaagaacag
aatgtttctggtacacttttaattcaacaggtacaggcttatacagatcctaaaagaaga
ttatattatgctaaaaaatttgtcttaggagctgctaaaaatctattaagaaacctaaaa
tattatcaaagaagagggagaaatttagatgatagcataaaagaaattacatcattaatt
cgacaaatagatcaagtgcatgatgttgaagaactaatgggggtcgaaggtactattcat
aggagatactatgcatcatggcaaagtgtttttattcccgatgtagatttttcaaaaagg
gtaagaagaccgcctgataatatggtaaatacacttatttcatttttgaatggattaatg
tatacaacgtgtttgtcagagatttatgtaacccagcttaatccgactattagttatcta
catagtccaatggatagaagattttcattatgtcttgatatatctgaaatttttaagcca
atgatagttgatagattaattttctcactgataaataaaaatatgattagtgaggaagac
tttaataaggaatcaaattattgttacttatctgaaaaatccaaacggataatcgttagt
gaatacgacaaatatatgaaacaaaaagttagatataaaaccttgcatagggatgtttcc
tatagacatttaatccgattagaatgctataaattagtaagatcgttggttgaaggagaa
acctatgagccttatgttatgggatggtaa

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