Leptopilina heterotoma: 122499145
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Entry
122499145 CDS
T08438
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lht
Leptopilina heterotoma
Pathway
lht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122499145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lht03019
]
122499145
Messenger RNA biogenesis [BR:
lht03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122499145
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122499145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
GerPC
Motif
Other DBs
NCBI-GeneID:
122499145
NCBI-ProteinID:
XP_043463213
LinkDB
All DBs
Position
Unknown
AA seq
2394 aa
AA seq
DB search
MNLDSLSFTLSQISYLVTKLNKRNFEESCQEISTLVQGKGLEADRHLLRCLLSSVDFSTE
EPPEPSAKDYYQVQLLREKLTYLLDKLYLISNICFAFDRPLLQQKTLIPSPKLFSQLQKV
LGLSLAQLVVIEIAFQHSENPELQSLALEDLQKQIPELVKHYVYSDRKNRSEELNGFTVE
TLHFILFFIFHEAQQIEITSETKEKFFKALRRDFPRDRVPVVLLPYLYPGDEETPQCQLQ
TMSSTQMDGNALVELIMELGYGFTSSVEECRAALTGLGAREISASCVARVLSHMARTCTG
LEDTGGLQSFWSNSNSGQDSNKDKSSDGGAKTWNVEVFVQTLKDMSSLQWNDVIIQLDHA
KFLVKDRQGLKLLITGLKLGLQLQGFPTDVFPVELFYRHWENVEGQFSLVQQILKHPDIF
CFADYPYHSVTVDVLKAAPEGDSKEAQSWRSLNVIELLLYIAERGFYAPVQEVFKWPIQH
CPDVLVLALLQINPPFTLLRQELLSTLMPIFFGNHPNSAVILHHAWHVNNLMIKTIIMQA
LAEWYLRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKLEKWLT
DKIREHGEHFVTACVKFLQRRCPQVTGSGIKEDPSVPKASQLPQETLTTILACLQVCAGN
VSQDCAEAIMTMVQNCSLMLSKGTMSRPPPPGVLRHRGLEPFNPATLSSQLFTSKQVDPL
ANLGTSLASMGLSSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPIISQIHSG
PVGTPGPSVIASGTAIGGLGRLEPLGGIEKSRLTDTTNTFPDMTQNFSKEIEDEANSYFQ
RIYNHPPHPTLSIDEVLDMLKKFQDSGSKRERDVVNCMLRNLFEEYKFFPRYPDKELHIT
AQLFGGIIERGLVNSYVTLGLALRFVLDGLRKPEGTKMYYFGIAALDRFKSRLKDYQTYC
EHVRVIPHFSEFPNHLIEYIEYGLQGQEPPSRPQGPVVPKNVMLPPVTTPYKTITTTTIT
TSTTQSKPATTSTASLSTRPSIANATNIDTLLVATDKEEKITSPPEALQDKTAFIFNNLS
QLNLQQKCDEIKDIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLKIPEINKMVTR
ETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILHIDIDLKSLLAEAYHK
GQQELLYVVPFVAKVLESCAKSRVFRPPNPWTISIMNVLAELHQEPDLKLNLKFEIEVLC
KNLSIDVAELKPAVYLKDPERLRNLEYQLSHPNKKHIESSNNQQQQSQGPIEELVGPTTT
VPMIAQAAPPINTTPSLPSGQPEPRFNYVDITVTGITNIAPHITINNQLPILQAHPQLKQ
FVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDSDENRMRQAARHMVRNLTAG
MAMITCRDQILASISTNLKQNFLNAMIGHTPQQKELVDQAANVIANENMELACAFVQKTA
IEKAVPEMDKRLMNEFELRKIARQEGRRYCDPLVKYQSERMPEQIRLKLTGVTPHQMAVY
EEFARNIPGFQPMTDRDSRALFMPKPISGPMQFAANPAVAAAAVQQVAAYAAAAVSTDEI
GAMLEKLASEVEHLLAAMGPSAPPPQQVALHGLLEAIIATRRARDANTASALLKKAVEGL
MDCPIVTSGVMESEIILRFRDLHVRILKCLQDQRAYGMQWTNKNVTRCLIECREEFRYNF
EAIDCLIRSHLLILSQYDMALAQAMENGSAMATAFAMQLIQLYLVEERQTTHVTESDLYN
TIEILVRMAHLRTPPEGIMLYRLTNLIESLRANHDPGVLADRMPAGPTAHIHSGIMQAKA
RDYDDPPGLFEKTEFLLREWVQMHHSATHARDPTKAFSTFVHHMNIHGILKTDDLITRFF
KISTQMCVDLCYRALVEPSSGASAIRAKCFHTLDAFVRLVALLVKHSGDTTNTHTKINLL
NKVLGIVAGVLLQDHEIRQCDFQQLAYHRIFIMLFLELCAPEPVLEAINFQVLTAFCHTL
HILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYLAPYLRNAE
LAKPVTSLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLP
DPFTPNLKVDMLPEIAHAPRVLTNFASMIQPPNFKKELDSYLKARAPVTFLSELRSNLQI
SQEAGSRYNIQLMNALVLYVGTTAITFIRGKGHTPNMSTIAHSAHMDIFQNLAVDLDTEG
RYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGL
LITFIELIKNPTYKFWTHEFVHCAPEIEKLLESVARSCMVQKQVQSNTESEIPE
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttacgaagtta
aataaaagaaattttgaagaaagctgccaggaaatatcaactttagtacaggggaagggt
ttggaggcagacagacatttattgcgctgtttgctttctagtgttgacttttcaacggaa
gaaccaccagaacctagtgcaaaagactattaccaagttcagctccttagggagaaactt
acttacttattggataaattatatctcatttcgaatatttgtttcgcttttgatcgtcca
ttacttcaacaaaagactttaattccatcgccaaagttattttcccaactgcaaaaggtt
cttggtctctcgttagcccaacttgttgtgattgaaattgcctttcaacattcggagaac
cctgaactccagtcactagcattagaggatcttcagaagcaaataccggaattagtgaaa
cattacgtttatagtgatagaaaaaatcggagtgaagaattaaacggtttcacagttgaa
acattacactttattctgttttttatttttcacgaagctcaacaaattgaaataacaagt
gaaacgaaggaaaaatttttcaaagccttgagaagggactttcctcgtgatcgggtgcca
gtggtgttgttaccatatttgtatccaggagacgaggaaacgcctcagtgtcaactgcaa
actatgtcgtccacacaaatggatggaaacgcactagttgaactcataatggaattaggt
tatgggtttactagtagcgtggaagaatgtagagcggctttaactggactcggtgctaga
gaaatttccgcatcatgtgtggcacgagttctatctcacatggctcgtacttgtacgggt
ctggaagacactggcggtttgcagtcgttttggtcgaattcgaattcggggcaagattcg
aataaggacaaatcatctgatggtggggcaaaaacatggaatgtcgaagtttttgtacaa
accctaaaagatatgtcgtcgctgcaatggaacgacgtcatcatacaactcgatcacgcc
aagtttctcgtaaaagatcgacaaggattaaaacttttaatcacaggattaaaattaggc
cttcaattacaaggttttcccaccgacgtatttcctgtcgaactcttttacagacattgg
gagaatgtagagggtcagttttctctagtgcaacaaattttaaaacatccggacatcttt
tgttttgctgactatccatatcactcggtaactgtcgacgtattgaaagccgcccccgag
ggtgacagtaaagaagctcaaagttggagatctttgaatgtcattgaacttctattgtac
attgcggagagaggattctacgcccctgttcaagaagtgtttaagtggccaattcaacac
tgtcctgatgttctcgttttagccttactccaaattaatccgccatttacgttactcagg
caagaactacttagtacactaatgccgattttctttggaaatcatcccaattccgctgtg
atattgcatcatgcctggcatgtaaataatctcatgataaagactataataatgcaagct
ttagctgaatggtacttacgaggtgatcatgaccaaacgaggttgtcgcgaattctagat
gtagctcaggatctcaaggcattatcagcgcttcttaatgcacagtcatttccctttgtc
atcgatcttgcgtgtttagcttcgagaagagagtacttgaaattggaaaagtggttgact
gataagattagagagcacggagaacactttgtcactgcttgcgttaagtttctgcagaga
agatgtccgcaagtcacgggctctggtatcaaggaggatccatccgttccaaaagccagt
caacttccacaggaaacactcacgacgatacttgcctgtctacaagtttgcgctggaaat
gtttcccaagattgcgctgaagcaattatgacaatggtacaaaattgtagtttgatgctt
agtaaaggaactatgagtagaccacctccaccgggtgttttgagacacaggggccttgaa
ccttttaatccagcaaccttgagcagccaattattcacctcaaaacaagtggatcccctt
gcgaatttgggaacaagcttggcttccatgggacttagctccagtcttggtccaccaagt
agttctgcatttaatttgcccggagcactaggacccttagtctctgctcccggttctcca
tctagattaatgggaccctctccaagtccatttccaataatatctcaaatccattcagga
ccagttggcactccaggtccatcagtcattgccagtggtacagcaattggtggtttaggt
cgtcttgaaccattgggtggaatagagaaatcaagacttaccgatacaacgaatactttc
cccgatatgacacaaaacttttcaaaagaaatcgaagacgaggcgaatagttattttcaa
cgaatttacaatcatccgccacatcctacactctcgatcgatgaagttttggatatgttg
aagaaatttcaagattcgggaagtaaacgagagcgagatgttgttaattgcatgcttcgc
aatctttttgaagagtacaaattctttccccgttatccggataaagaattacacatcacg
gcgcaacttttcggtggaatcattgaacgtggcttggtcaacagttatgtcactctggga
cttgcattgagatttgtcctcgacggtctcaggaaacccgaaggcactaaaatgtattat
ttcggtatagccgcattggatcgatttaaaagtcgattgaaagattatcagacgtattgt
gagcatgttcgagtgataccgcatttcagtgaattccccaatcatttaatcgagtatatt
gaatatggacttcagggtcaagagcctccatcgagacctcaaggtccagttgtaccaaaa
aatgtgatgctgcctcccgttactactccttataagactataacaacgactacgattacg
acaagtacaacgcaatcgaaacctgcgacaacatcgaccgcatctctttcaactaggcct
tccatagcaaatgcgacaaacatcgatactctccttgtagccacagataaagaggagaag
ataacttccccgccagaagctttgcaagacaaaactgcctttatcttcaacaatctaagt
cagctgaatttacaacaaaaatgtgatgaaattaaggatatagtcaccgaagaatattgg
ccctggatggcacaatatttagtaatgaaacgagccagtattgaactaaactttcacgct
ctttattcaaactttcttgattgtttgaaaatccccgaaattaacaaaatggtcaccaga
gaaaccttcaggaacatcaaagttctactccgcagtgataaaggaatcgctaacttttcg
gatagatctcttctcaagaatcttggtcattggttaggaatgttaactcttggacgaaat
aaaccaattttacatattgatattgatttaaaaagtcttttggccgaagcttatcacaag
ggccaacaagagcttctctatgtcgtaccctttgttgccaaggttctagaaagctgtgca
aaaagtcgcgtttttcgtccgcccaatccctggacaatatcaataatgaacgttctcgcg
gaactccatcaagaaccagatttaaaactcaatcttaaatttgaaattgaagtgctttgt
aaaaatttgagtatcgatgtcgccgaactgaaaccggccgtttatctcaaagatccggag
agattacgcaatttggaatatcaattatcgcatccgaacaagaagcatatagagagtagc
aataatcaacaacagcaatcgcagggtccaattgaagaattggttggtccaacaacaact
gttccaatgattgcacaagcggctccaccaattaatacaacgccttcattaccctctggt
caacctgaaccgaggtttaattatgtcgacattacagtcactggaattacgaacatcgct
ccacatattaccatcaacaatcaattgccaattttgcaagctcatccacaactgaaacaa
ttcgtccgtccagctgtagaaagagcaatccaagaatggattcatccagtagtagatcgt
tccattaagattgcacttacaacaagtgaacaaatagtgagaaaggatttcgccctcgac
tccgatgagaatagaatgcgacaagccgctcgtcacatggtccggaacttgacggcaggc
atggcaatgattacatgtcgagatcaaattttagcatccataagcacaaatttaaaacaa
aatttcctgaatgccatgattggccacactccacagcaaaaagagcttgttgatcaagca
gctaatgtgattgctaacgaaaatatggaacttgcttgcgctttcgtgcaaaaaactgca
attgagaaagctgttcccgaaatggataagagactcatgaatgaatttgaattgagaaaa
atcgcccgacaagagggtaggagatattgtgatccattggttaagtatcaatcggaacga
atgccagagcaaattagattgaaactcactggtgtgacgccacatcaaatggcagtttat
gaagaatttgcgagaaatattcctggttttcaaccaatgacagatcgagactcgagggca
ttgttcatgccgaaacctatcagtggaccaatgcagtttgctgctaatccagcggtagca
gcagcagcagtacagcaagtggcagcttatgccgccgcagcagttagtacagacgaaatt
ggagctatgcttgaaaaactggcgtctgaagttgagcatttattggcagcaatgggacct
tcagctccacctcctcagcaagttgctcttcacggacttcttgaagccatcattgctacc
aggagagctcgagatgcaaacaccgcgtctgccttgttgaaaaaagctgtcgaaggttta
atggattgtccaattgtaacaagcggtgttatggagtcagagattattttacggtttcga
gatttgcatgttcgaattttgaagtgcttacaagatcaaagagcctatggcatgcagtgg
acaaacaaaaatgtcacgcgctgtttaatagaatgcagagaagagtttcggtacaatttc
gaagcaatcgactgtttaataagatctcatttgctgattttgtcgcaatacgatatggct
ctagcacaagcgatggaaaatggaagtgcaatggccactgcctttgcaatgcaactgatt
caactttatttggttgaagaaagacaaactactcacgtcacagagtctgatctctacaac
actattgagatcctcgtcagaatggcccatcttcgaacaccaccagaaggtatcatgctc
tacaggctgacgaacttgattgaatctctgcgagcaaatcacgatcctggtgtacttgcc
gataggatgccagcgggaccaacagcccacattcactctggaataatgcaagcaaaagct
cgtgactatgacgatccaccaggcttattcgagaagacagaatttctgttaagagaatgg
gtgcaaatgcatcacagcgcgactcacgccagggatccaacaaaagccttcagcaccttt
gttcatcatatgaatatacacggtattctgaaaacagacgacttgattacgagatttttc
aaaatcagcactcaaatgtgtgtagatttgtgctatagagcactcgttgaaccaagttct
ggtgcatctgccattcgtgccaaatgttttcatactctggatgcctttgtgcgactagtc
gctcttctcgttaaacactctggcgatacaacaaatactcacacgaaaatcaacctactg
aataaagtacttggaattgttgctggagtcctacttcaggatcacgaaatccgtcaatgt
gattttcaacaactggcatatcatcgaatattcataatgctcttcctggaactttgcgcg
ccggaaccagttctggaggcgataaatttccaagtactgactgccttctgccacactctt
catattcttcgtccagcaaaagcctcgggcttctgctacgcctggctggaacttgtttcc
catcgtgttttcattggacgaatgcttgccattacaccgcaacaaaaatgttggggaatg
tacgctcaactactgattgatttattcaaatatctcgctccttatttgagaaatgctgaa
ctcgcaaagccggtaacttctctttataagggaacattacgtgttcttctggttcttctt
cacgattttcccgaatttctgtgtgactatcactacggattttgtgatgtgattccacca
aattgtatacaaatgagaaatttgattctcagtgcatttccaaggaatatgcgtttaccg
gatccattcactccaaatttgaaagttgatatgttacctgaaattgcgcacgcaccaaga
gttcttactaactttgcgtcaatgattcagccgccgaatttcaagaaggaactcgattcc
tacttgaaagctcgcgcgccagttacattcttgtctgaattgaggagcaatttgcaaatt
tcccaagaggcgggatcgaggtataatattcaattgatgaacgctcttgttttgtatgtt
ggaacgacggcaataactttcatacgaggcaaagggcacacgccaaatatgtcaacgatt
gcccactcggcgcacatggatattttccaaaatttggcagtggacctcgacactgaagga
agatatttgttcttgaatgcaattgccaatcaattgagatatccaaacagtcatactcat
tacttcagctgcacacttttgtaccttttcgctgaagcgaataccgaagctattcaagaa
caaattacgcgagtgttactcgagagactcattgtcaacagacctcatccatggggatta
ctcatcaccttcatcgaactgatcaagaatccaacgtacaaattttggacgcacgaattt
gtccactgtgcaccagaaattgaaaaattgttggagtctgtggcccgttcgtgtatggtt
caaaaacaggtgcagtccaacaccgaatcagaaattccagagtga
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integrated database retrieval system
