Linepithema humile (Argentine ant): 105668789
Help
Entry
105668789 CDS
T04898
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105668789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105668789
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105668789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_2
TPR_8
TPR_19
TPR_17
TPR_1
TPR_CcmH_CycH
ANAPC3
TPR_12
TPR_11
TPR_9
TPR_7
TPR_6
PknG_TPR
DUF7017
T7SS_EccA1_N
TPR_20
ARM_TT21_5th
Alkyl_sulf_dimr
BTAD
HrpB1_HrpK
TPR_21
TPR_10
TPR-S
ARM_TT21
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
105668789
NCBI-ProteinID:
XP_012216793
LinkDB
All DBs
Position
3:21591291..21596806
Genome browser
AA seq
1294 aa
AA seq
DB search
MSDDVKVLLKEARESFKQNEYLETMKKCKKILKKDKSNYTALVLLARAMQEIEEFKSQVT
LVLQKATEIQPDNPLAWQGLVAHYEKVSQNNEDWEKLAIAYCKLLKLDSDTPKFTHFVNK
VSEVVLRIKNDEVLTEALNTLSMLREVSTKEKTSLIDKTLAWVLTEYPKNNIQKYQELYE
SVLASVIKDTDLLNRQDYYRKYLKILYDFKKFNVLLIAAQDMYTQFQQDACSLEWICRIY
YEEMILNGTKFEINIIQFYEDLLKLNANSDIALIAKATYLESTDKIINSRECLNQAILLN
ARSFYAWLMLSRVQYKLYCWEEAENASKQALHLIKPNLKDKLQYDIELRLLDAMSRSSNE
QKLIQARQRCEELMESQFSAQLQLIYARINILLDNTYAVALDNMKDQDASKIQFLKALHL
KKRKQYEEAINTIELALDNSEAWLLFGKIYWDMEDYNHSLIAFLNGVQADSNNWECLVYL
GHYYREHGNDIDRSRRCYHAALQINPFSEEAGVGLSTTYRLLKNTDANIQLLQKLTMQDN
GPKWAWLQLGLQYLDQGDAAEAIKALQHVIRADPNDNHSWESLADAYLIRGAHTSALKSY
QRALQLKPGSLYPLIQLANIKVLIGQYNEAKEDFENILENDKQYILALKGLAEACLGLAR
ENITKQFLCRARENLQQAVDSLTDAVMMRSDLSCNWKLLGDVCYRIVTLPEKYCYIRVKP
ILMNYDSTEHYVKVKRDEILTLSIRCFCRTLSITQNSALLWHDLACCYSMQLERDSKINK
NDVAAKCFAAAKHAIKLCPQSWQHWNLLGVICTSPYIKNYALAQHCFIMAIDRESNNAIA
WSNLGTLYLHLGDIYRANEAFSRAQRADPSYINSWIGQGLIAEKSSRKEAMDLFRHSTQL
GYHDQAALGYAHWVLTTLLNPTMKKDPLFIYVIKNMHAIPAAADVLTWYTEREPTDVCAL
NTHGLLLERLKLYNTAAKQLVTALELSQGEERDMISINLARVLIKIGRYEEAVELCRQVK
NASFNSQCHLALSLFKAKQYEESYNTYEAALHWLADTETRKANVLCAMAAIAYIFQGADA
VKTLLFQCIQIEPPTIAGLLATAALGILHDDSNLTSLVLKELKPYEDNHEYGHHAVTLSA
YHHVIQGNLTEAIRILSKAIFKHPNDIRYWVRLVRVSLLDTSLDLFRRCAQIALVLSRNT
SMTDIVYVACASAYSHFGTKEGLRQAQKNIFTYPTNVESWANFIAALVPRCEDGDSKINH
QWVSSLISIVKSQFQTSEYMSQWLLRNEKKINSS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgatgtaaaggttttgctgaaggaagctcgtgaatccttcaagcagaatgaa
tatttggaaactatgaagaaatgcaaaaaaatcttgaagaaagacaaaagcaattataca
gcattagttctattagctcgtgccatgcaggagatcgaagaatttaaatcacaggttacc
ttggttcttcaaaaagcaactgaaatacaaccagataatccattagcctggcaaggttta
gtggcacattatgaaaaagtgtcacagaataatgaggattgggaaaagttggctatagct
tattgcaaacttttgaagttagatagcgatactcctaagtttacacattttgtaaataaa
gtctctgaggttgtgttgaggatcaagaacgatgaagtactgactgaagcattgaacaca
ttgagcatgttgcgagaagtttctaccaaagagaagacaagtttaattgataagactctg
gcctgggttttaacagaatatcctaagaataatatacaaaagtatcaggagctctatgag
agtgtattagcatctgtaataaaagatacagatctgttgaacagacaagattattatagg
aagtatttaaagatattatatgatttcaaaaagttcaatgttttattaatagcagcccag
gacatgtacactcaatttcaacaagatgcttgttctttagaatggatatgccggatctat
tatgaagaaatgatactgaatggaacaaaatttgaaatcaatataattcagttttatgag
gatcttttaaagttgaatgcaaattctgacattgcactgattgcaaaggcaacatattta
gagagtacagataagattatcaattcccgtgagtgtctgaatcaagcaatcttgttgaat
gcaagatccttctatgcttggttgatgttgagtcgggtgcagtataaactctactgctgg
gaagaagctgagaatgcttctaaacaagcgttacatttgataaaacccaatttaaaggac
aaactacagtatgatattgaattgagattacttgatgcaatgagtaggagcagcaatgaa
caaaagctgatacaagcgcggcagaggtgtgaagagttgatggagagtcaattttccgca
caattgcaattgatatatgcacgaataaatatattgctggacaatacctatgctgtcgcg
ttagataatatgaaggatcaggacgcaagtaaaatccaattcctcaaagcgttgcatttg
aagaaacgaaagcaatacgaggaagctattaacaccatcgagctagcgttggataattct
gaagcctggttgctgtttggtaaaatatattgggacatggaagactacaaccacagtctg
atagctttcttgaacggcgtccaggcggatagcaataattgggagtgcctggtttatctg
ggacattattatcgcgaacatggtaacgatatagatcgttcgagaagatgttatcacgct
gcattgcaaattaatccgttttccgaggaagctggtgtcggactaagcacaacttatcga
cttcttaaaaacaccgatgctaacatacagctgttgcaaaaactaaccatgcaagataat
gggccgaaatgggcttggctccaattaggtctgcagtacttagatcaaggtgacgccgca
gaagccatcaaagcgttgcagcatgtgatcagggctgatcctaacgacaatcacagctgg
gaatctctggcggatgcatatttaatacgcggcgctcatacatcagcattgaaatcgtat
caacgcgcgctacagctgaaaccaggatccttgtatcccttgatacaacttgcaaacatc
aaagtgctgattggccagtacaacgaagccaaagaagatttcgagaatatattagaaaat
gataaacaatacattctcgcattaaagggcttagctgaagcgtgtttgggtctggcgagg
gaaaatatcacaaaacaatttctgtgccgtgcgagagaaaatctacagcaagcagtagat
agcctaactgatgctgttatgatgcgcagtgatctgtcttgcaattggaaattgctcggc
gatgtgtgctataggatagtcactctgcctgaaaaatattgctacataagagttaagcct
attttaatgaattacgatagcactgagcactatgtaaaggttaaaagagacgagatactc
acgttgtcaataagatgtttctgccggacgttgtctatcacgcaaaattctgctttgctg
tggcacgatttagcgtgttgttattcaatgcaattggaacgtgattctaaaatcaataag
aatgacgtggcagccaagtgctttgctgctgcaaagcacgccattaaactttgcccacaa
tcatggcaacattggaaccttctgggtgttatttgtacatcgccgtacataaaaaattac
gcgcttgctcagcattgtttcattatggcgattgacagagaatcgaataatgcgatagca
tggagcaatctggggacgttatacttgcatctaggagatatctacagagcgaatgaagca
ttttctcgagcccaacgcgcggatcctagctatatcaacagctggatcggtcaaggatta
attgcggagaagtcctcgaggaaggaagcgatggacctgttccggcattcgacacaacta
ggctaccacgatcaagcggctctaggctatgctcactgggtgcttactactctcctgaat
cccacaatgaagaaagatccgttgttcatttatgttatcaagaacatgcacgcgataccc
gcagcagcggatgttctcacttggtatacagaacgcgaaccaaccgatgtttgtgctctg
aacacccacggtttattgttggaacgattaaaattgtataacacggcggctaagcaactc
gtcacggctttagaactgagccagggcgaagagagggatatgatatctataaacttggca
cgtgtcctgattaaaataggaagatacgaagaagcagtggaattgtgcagacaagtgaaa
aatgcaagtttcaactctcaatgccacttagcattaagcttattcaaagccaaacaatac
gaagaatcgtacaacacgtacgaagcagctctacactggttggcggacaccgaaacgcgc
aaagcgaatgtcttgtgcgcgatggccgcgattgcttacatcttccaaggggcagacgct
gttaagaccctgctgttccagtgtatacaaatagaaccgcctaccatagccggcttgttg
gcgaccgctgcattaggaattttgcatgacgattccaatctgacctctttggtgctgaag
gaattgaaaccgtatgaagataatcacgagtatggccaccatgccgtcacattgtccgcg
tatcatcacgttattcagggaaatctcaccgaagccatacgaattttaagcaaagctatt
ttcaaacatcccaatgatattagatattgggtgcgccttgttagagtttcgctattggac
acaagcctggatctcttccgtagatgtgctcaaatagcactggttctaagcaggaatacg
tccatgactgacattgtatatgtcgcttgcgcatcggcgtacagtcacttcggcacgaaa
gaaggcctccggcaggctcagaaaaatatatttacatatcccactaatgttgagagctgg
gctaattttattgccgcacttgtgcccagatgcgaagatggggattcaaagatcaatcat
caatgggtatcgtcgttaatatcgatagtgaaatcgcaattccaaacttctgaatatatg
tcacaatggctgcttcgcaacgaaaaaaaaattaatagttcttaa
DBGET
integrated database retrieval system
