Linepithema humile (Argentine ant): 105679585
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Entry
105679585 CDS
T04898
Symbol
para
Name
(RefSeq) sodium channel protein para isoform X6
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lhu04040
]
105679585 (para)
Ion channels [BR:
lhu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105679585 (para)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_7
FAM163
SieB
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
105679585
NCBI-ProteinID:
XP_012235099
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All DBs
Position
2:complement(10254386..10322367)
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AA seq
2067 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIESRIAEEEARQRELQQRRAEGEVRYDDEDEDEG
PQPDPMFEQGGPLPVRMHNDFPPELSSTPLEDIDTFYHNQRTFVVISKGKDIFRFSATDA
MWLLDPFNPIRRVAIYILVHPIFSLFIITTILVNCILMIMPTSPTIESTEVIFTGIYTFE
SAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVA
IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKNFPEDGSWG
NLTNDNWVKFVSNESNWYRDEAKNMPLCGNSSGAGQCLPGYTCLQGYGGNPNYGYTSFDT
FGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYD
ELQKKAEEEEAAEEEAMREAEEAALAKENKLAAQAAAREAAAVAAAAAAAADQIVKSPSN
FSCQSCELQLYIQEKGNDDNNKEKMSIRSIESAGDQRHVKQINNNHNAANKARKVSAVPR
AANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFVPPGGDRKPLVL
STYLDAQEHLPYADDSNAVTPMSEENGAIVVPVYYANLGSRHSSYTSHASRLSYTSHGDL
AFPGIRGIDSIGKQLTKQEQILRNRNNKQTTPANGHVTDTNQKSYHFETDLEDPMGKTKQ
QDNPFIEQSQQHTVVDMKDVMVLNDIIEQAAGRQSQTPEQGVSTYYFPTDDDEEGPTFKD
KLWAGLLRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIVVNTLFMALDHHDM
DKDMERVLKSGNYFFTATFGIEAGLKLIAMSPKYYFQEGWNIFDFLIVALSLLELGLEGV
QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTFVLCIIIFIFAVMGMQLF
GKNYTDNVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLA
TVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKITEAIDRIARFIKWIKRNVLYIA
KLMRAKFTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKELNQLEVA
IGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQNEDDTISNKSYG
SHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEGSQEDLEDECEEEEEGDVVIIHAD
DDPIQPNYPSDCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVITMI
LLSSLALALEDVHLQSRPVLQDILYYMDRIFTVIFFLEMLIKWLALGFRKYFTNAWCWLD
FIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIF
NVLLVCLIFWLIFAIMGVQLFAGKYYKCVDANKTTLNFEIIPDRNACDAENYTWENSPMN
FDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVGKQPIRETNIYMYLYFVFFIIFGSFFT
LNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWRPQAI
VFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSETFSNVLDYLNMIFIVIFTSECLMKIF
ALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGA
KGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQS
MILLFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIV
INMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEP
PLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETGDLAEVQARPD
EVGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCVRQTKVLVES
DGYVTKNGHRVVIHSRSPSVTSRTADV
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgagtctcgcattgccgaggaagaggccaggcagcgggag
cttcagcagagaagagcggaaggcgaggtacgatatgacgacgaggacgaggacgaaggt
cctcagccggatccgatgttcgagcagggggggccgctccccgtccgaatgcacaacgac
tttccacccgagttgtcctccacacctctcgaggatattgataccttctaccacaatcaa
aggaccttcgtcgtcattagcaaggggaaggacatattcaggttttcggcgacggatgcg
atgtggttgctcgacccgttcaaccctatacgtcgcgtcgccatttacatactggttcat
ccgatcttttccctcttcatcatcaccacgatattggttaactgtatactcatgatcatg
cccacctcgcccaccatcgagtccaccgaagtgatatttacgggcatctacacatttgag
tccgccgttaaggtgatggcgaggggtttcattctgcagccttttacctatcttagagat
gcatggaattggctcgacttcgtagttatagctttagcttatgtgacgatgggcatagat
ctaggcaaccttgccgctctcaggacatttcgagtcctccgagccttgaagactgtcgct
attgtaccaggtctgaaaaccattgtcggcgctgtgatagaatccgtgaagaacctgcgc
gatgtgataatcctgacgatgttctccctctccgtctttgcgctgatgggccttcagatt
tacatgggggtcctcacgcaaaagtgtataaagaactttcctgaggacggctcctggggc
aacctgaccaacgataattgggtgaaattcgttagtaacgaatctaattggtacagggac
gaggctaaaaatatgcctttatgtggaaattcatcgggagcggggcaatgtctgcccggc
tacacgtgtttacaagggtacggcggtaatccgaattacggttacacgagcttcgacacc
ttcggctgggcattgctctccgcctttcgtctcatgactcaggactactgggagaatctc
tatcaattggtgctaagatcagccgggccgtggcacatgctcttcttcatcgtcatcatc
ttcctcggctctttctatctcgtgaacttgattctcgctatcgtcgcgatgtcgtacgac
gagttgcagaagaaggccgaggaggaggaggctgccgaagaggaagctatgagggaagcc
gaggaagccgcgctggcgaaggagaacaagctcgccgcgcaggccgccgcgcgggaagcc
gcggccgtggcggcggccgccgcggcggccgcggatcagatcgtcaagtccccgtcgaac
ttctcgtgccagagctgcgagctgcagctctacatccaggagaagggcaacgacgacaac
aacaaggagaagatgagcatacgctcgatcgagtccgccggcgaccagcggcacgtcaag
cagatcaacaacaaccacaacgctgccaataaagcgcgaaaagtcagcgccgtccctcgc
gccgctaatggccagtttacttatgcctaccaggaaagcctgcggaaggcgagcctgagc
ctacccggctcaccgttcaatctgcgccgcagcagccgtggcagccaccagttcacgata
cgcaatggccgcggccggtgcttcgtgccgccgggcggcgaccggaagcccctcgtgctg
tcgacgtacctggacgcccaggagcacctgccgtacgccgacgattcgaacgcggtcacg
ccgatgtccgaggagaacggcgcgatcgtcgtgccggtgtactacgcgaacctcggctcg
cgtcactcgtcctacacctcgcacgcctcgcggctctcctacacgtcccacggcgacctg
gccttccccggtatccgtggcatcgacagcatcggcaagcagctcaccaagcaggagcag
atcctcaggaatcgcaacaacaagcagacgacgcccgcgaacggccacgtcacggacacc
aatcaaaaatcctatcacttcgaaaccgatctggaggatcccatgggcaagaccaagcaa
caagacaatccgttcatcgagcagtcgcagcagcacaccgtcgtcgacatgaaggatgta
atggtgctgaacgacatcatcgagcaggccgccggtcgccagagccagacgccggagcaa
ggagtttcgacctattactttccgacagacgacgatgaagaagggcctacgttcaaggac
aagttatgggccggattgctacgttgtatcgacatcttttgcgtctgggactgctgttgg
ctctggcttgaatttcaaaagtacgtgtccttgttggtgtttgatccgttcgtagagctc
ttcatcacactctgcatcgttgtcaacacgctctttatggctctggatcaccacgacatg
gacaaagatatggaaagggtgctcaaatctggcaattacttcttcacggcaacattcggc
atcgaagcgggtctgaagctgatagcgatgagcccgaaatattattttcaagagggctgg
aacatctttgatttcctcatcgtcgctctgtcgcttctggaattgggcttggaaggtgtg
caaggtctgtcggtattgcgatccttcagattgctgagagtgttcaagctggctaaatca
tggcctacgctgaatctgctgatctccatcatgggcaagacggtgggcgcgctgggtaat
ctaacgttcgtactgtgcatcatcatcttcatcttcgccgtgatgggcatgcagctcttc
ggtaagaactacaccgacaacgtcgaccgcttcccggacggcgacctgcccagatggaac
ttcaccgatttcatgcactcctttatgatcgtgttccgagtgttgtgcggggagtggatc
gagtctatgtgggattgcatgctcgtcggcgacgtctcttgcataccgttcttcttggcc
accgtcgtcatcggtaacttggttgtcctgaatctcttcttagctctgttgctcagcaac
ttcggctcgtcgaatctgtcggccccgactgcggacaacgacacgaacaagatcacggag
gcgatagatcgaatagcacgtttcattaaatggatcaagcgaaatgttctttacattgct
aagttgatgcgagccaaattcaccaaccagatatccgatcaggcgccaggtgagggaccg
tccaacagttggaaagaagatgggattgatcgcgatggggacctagatcttgcagatgga
gagctggacgcgtacagagacaagaagagcgccaaagagcttaatcaacttgaagtcgcc
attggcgacgggatggagtttaccattcacggagatttgaagaacaagctgaagagaggc
aagctgtgcatgaacaatacgaaggttatcgcaaattcaataaaccatcacgattatagg
ctggacaacgattacattaatcagaacgaagacgacactatcagtaataaatcatacggc
agtcacaaaaatcgcgcgttcaaggacgaaagccacaaaggcagcatggactcgctgaac
ggcgaggagaagaaggatgcgagcaaggaagacttggagcaggaagaaggttcgcaagaa
gatctcgaagacgagtgcgaagaagaggaagagggcgacgtcgtgatcatacacgcggat
gacgatcctattcagccgaattatccctccgattgctgtccggaaaattgctacaaaaag
tttccattcctcgccggcgacgacgacgcgccgttctggcaaggctgggcgaacctgaga
ttgaaaaccttccagctgatcgagaacaagtacttcgagactgccgtcatcaccatgatt
cttctgagcagtttggccttggccttggaggacgttcatcttcaatctcgacctgttctg
caggacatattgtactacatggaccgaatattcactgtgatcttcttcctcgagatgttg
atcaagtggctagctctaggattcaggaagtatttcacaaacgcctggtgctggctcgac
ttcatcatcgtcatggtatcgctcattaacttcgtagcgtcgctctgtggcgctggcggg
attcaagccttcaaaacaatgcggaccctaagggccctaaggccgctcagggcgatgtct
agaatgcaggggatgcgggtagtcgtcaacgccttggtccaagccattccatccatcttc
aacgtgttgctggtatgccttattttctggcttatattcgctatcatgggggtgcaactg
tttgctggcaaatattacaaatgtgtcgacgcgaacaagacgacactcaacttcgagata
ataccggatcgcaacgcttgcgacgctgagaattacacgtgggagaattcgccgatgaac
ttcgatcatgtcggcaaagcgtatctgtgcctatttcaagtggcgactttcaaaggatgg
atccaaatcatgaatgacgcgatcgattcgagggaggtcggtaagcagccgattcgtgaa
acgaacatttacatgtatctctacttcgtgtttttcattatatttggatcgttttttacc
ctcaacctattcattggtgtgatcatcgataactttaatgagcaaaagaagaaagccggc
ggttccctcgaaatgttcatgacagaagatcagaagaaatattacaatgccatgaaaaag
atgggcaacaagaagcctctgaaggcgattcctcgaccgaggtggcggccgcaggcgata
gtgtttgaaatagtgacggacaaaaagttcgatatgataatcatgctgttcatcgggctg
aacatgctcacgatgacattggaccattatcaacagagcgaaacgttcagcaatgttctg
gactatctcaacatgatattcattgtgatattcaccagcgagtgtctcatgaagatcttc
gctctgcgctaccactacttcaaggagccatggaacctctttgattttgttgttgttata
ttgtcaatattaggtctggtgctcagcgacatcatcgagaaatacttcgtgtcgccgact
ttgcttcgtgtggtgagggtggcgaaggtcggccgtgtacttcgactcgtgaagggcgcc
aagggtatccgaacccttctcttcgccctagcgatgtcactaccggccctcttcaatatt
tgcctattgctgtttctggtgatgtttatcttcgcgatattcggcatgtccttcttcatg
cacgtcaaggacaagagcggactggacgacgtgtacaacttcaagacgtttggacagtcg
atgatactgctgttccagatgtcaacgtcggcaggctgggacagcgtcctcgatggcata
ataaacgaggaggattgccaggagccgaacaacgagatcggttacccgggcaactgtggc
tcgtcgacgatcggaatcgcctacctgctctcgtacctcgtgatcagcttcctgatcgtc
atcaacatgtacatcgccgtgatcctcgagaattactcgcaggcgaccgaggacgtgcag
gagggcctgacggacgacgactacgacatgtactacgagatctggcaacaattcgatccg
gatggcacgcaatatatacgatacgaccagctgtcggaattcctcgacgtattggagccc
ccgctacaaatacacaagccgaacaagtacaagattgtgtcgatggatatccccatatgt
aagggagaccttatgttctgcgtggacatcctcgatgccctcaccaaggactttttcgcg
cggaagggcaatccaatagaggagacgggcgacctcgccgaggtgcaggcgcggcccgac
gaggtcggttacgagccggtctcgtccacgctgtggcggcagcgcgaggagtactgcgcc
cgcctcatacagaacgcctggcggaagcacaagcagcagcgcctcggcgggccgagcgag
gagagcgacgatccggacacggatctgtgcgtgcggcagaccaaggtgctggttgagagc
gacggctacgtcacgaagaacggccatcgcgtcgttatacacagccgatcgccgagcgtc
acctcgagaaccgcggacgtctga
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integrated database retrieval system
