KEGG   Leishmania infantum: LINJ_22_1430
Entry
LINJ_22_1430      CDS       T01112                                 
Name
(RefSeq) putative exosome complex exonuclease RRP45 homolog
  KO
K03678  exosome complex component RRP45
Organism
lif  Leishmania infantum
Pathway
lif03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LINJ_22_1430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lif03019]
    LINJ_22_1430
Messenger RNA biogenesis [BR:lif03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LINJ_22_1430
SSDB
Motif
Pfam: RNase_PH RNase_PH_C NAD_binding_5 Apo-CIII TEX13
Other DBs
NCBI-GeneID: 5069080
NCBI-ProteinID: XP_001465658
UniProt: A4I017
LinkDB
Position
22:597762..598853
AA seq 363 aa
MLYRTAVPVPADALVQRNLEFTRTAWKAGLRPDQREANQLRVVEMDFPLLSRDVVQVKCG
NTVATATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPLDQFKEIKRISMYLTRLLSSSV
LETEGLCVIPGRRVWSIDAEVIIVNNDGNVQDVAQWAVMAALQHVRRPELTIRGEDVIVH
PPHERDPVPLPLHHTPLSFTFAVCANPQEVQLAVRAATLRRAQAPRAGASSGANADEGDG
EAKDLGWSSNALQVVVDPSLEEAAAAACTVSVAVNGEGHVCSLEKADGCDVSIAYLEQCM
KAATKLTQALLTQMKESMEAHNAKRKEAVRSQFLWAQQRHGIQAIATPGDEGEHASKKAK
TEE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgctttaccgcacggcagtgccagtgccggctgacgcgcttgtgcagcgcaatctggag
ttcacgcggaccgcgtggaaggcaggcctccgtcccgatcaacgagaggcgaatcagctg
cgggtggtggagatggacttcccgctgctctcccgtgacgtggtgcaggtgaagtgcggc
aacaccgtcgccacggccactgtcagctgcgaccttgtagagccctccccgtaccgtcca
aagcacggcttcttcgaggtgcatgcccgccagctgctgcacgaacgcgaccctctcgac
cagtttaaggagattaagcgcatcagcatgtacctgacgcgactgctctccagcagtgtg
ctggagacggagggcctttgcgtcatcccaggccgccgcgtgtggagcatcgatgcagag
gtgatcattgttaacaatgatggcaacgtgcaagatgtggcgcagtgggctgtgatggcc
gccctgcagcacgtacgcagacccgagctcaccattcgtggcgaagacgtgattgtacac
cccccgcatgagcgggacccagtgccgctgccgcttcatcacacccccctctccttcacg
tttgctgtttgcgccaatccgcaggaggtgcagctggcggtgcgcgcggccacgctgcgc
cgtgcacaggcacctcgagccggtgcctcttccggcgccaacgcggatgagggcgacggt
gaagcgaaagatctcggctggtcgagtaacgcactgcaggtcgtggtggatccgtcgtta
gaggaggctgccgctgccgcgtgcacggtgtcggtggccgtgaacggtgagggccacgtg
tgctcgctggagaaagcggatggctgcgatgtgtcaatcgcgtacctggagcaatgcatg
aaggctgccacgaagctcacgcaggcgctgctgacgcagatgaaggagtcgatggaggcg
cacaatgcgaagcgcaaggaggcggtgcgcagccagtttctctgggcgcagcagcgtcac
ggcatccaggctatcgcgaccccgggggacgagggggagcacgcaagcaagaaagccaag
acagaggaatga

DBGET integrated database retrieval system