KEGG   Leishmania infantum: LINJ_28_0870
Entry
LINJ_28_0870      CDS       T01112                                 
Name
(RefSeq) putative RNA polymerase B subunit RPB8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lif  Leishmania infantum
Pathway
lif03020  RNA polymerase
lif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LINJ_28_0870
  09124 Replication and repair
   03420 Nucleotide excision repair
    LINJ_28_0870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lif03021]
    LINJ_28_0870
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_28_0870
Transcription machinery [BR:lif03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LINJ_28_0870
  RNA polymerase III system
   RNA polymerase III
     LINJ_28_0870
  RNA polymerase I system
   RNA polymerase I
     LINJ_28_0870
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LINJ_28_0870
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 5070303
NCBI-ProteinID: XP_001470118
UniProt: A4I3F6
LinkDB
Position
28:298425..298874
AA seq 149 aa
MSANPVILEDTFTVNGVNTEGTVYLRVSRIRCVNQDGSLTITTDINSEEFPVSTNDRLTI
VLANSLELGGKTGSKYYDHSVYHRETRLNDCDYAMHGRVYGHEVVENGLEVNVHISCGGL
LVNIVGKPQGLRDVHYNSDVYILIKRVKN
NT seq 450 nt   +upstreamnt  +downstreamnt
atgagtgcaaaccccgtcattctcgaggacaccttcacggtgaacggtgtcaacaccgaa
ggcacggtgtaccttcgagtgtcgcgtattcgctgtgtcaatcaggacggctccctcaca
ataacgacggacatcaactccgaggagttccctgtttccacgaacgaccgcctgacgatc
gtgctggccaactcgcttgagctagggggcaagacgggtagcaagtactacgatcacagc
gtttaccaccgcgagacgcgactgaatgactgtgactacgccatgcacggccgcgtctac
ggacatgaggtagtcgagaacggcctagaggtgaatgtgcacattagctgcggtggcttg
ctagtgaacattgtcggcaagccgcaggggctgcgagatgtgcactacaacagcgacgtg
tacattctgatcaagcgcgtcaagaactga

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