Leishmania infantum: LINJ_36_0860
Help
Entry
LINJ_36_0860 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lif
Leishmania infantum
Pathway
lif03022
Basal transcription factors
lif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LINJ_36_0860
09124 Replication and repair
03420 Nucleotide excision repair
LINJ_36_0860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_36_0860
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_36_0860
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LINJ_36_0860
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LINJ_36_0860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5073624
NCBI-ProteinID:
XP_001469523
UniProt:
A4ICQ4
LinkDB
All DBs
Position
36:285965..287638
Genome browser
AA seq
557 aa
AA seq
DB search
MPSSSSALDVPLVEVICSYPTREGLCAECPALLLLVYQHVVAELQAGRRAVDVFRGTSRQ
DHLSELLGVRSLSELFEHLYPLSQSCTLDESTAGSQFWRQARATLEAAWAPPHDAKARAL
LTQVRGQPRFRFCGPRDAETPGEGYPLHPVSLERALATSKRFLRTAMTCALDGSTDALAG
RQPELRAVLQLAHLVPHTPSTGAPPRKEVTPEGISFCMVSLQQRWWVLVNAALERVLLLT
RAAANGNGNTSGSSGVTKSLLWQLLAVLSVLDTAHYVFAFPERQQDLAAHHLLARLSEVG
LVYPLLSNDRKCFVLSPDFLHAIHWHASTPLSLTFNHHLLRSVSGVSDIRREDTDTIITE
TNFRLYAYTDDADLLNILNQFAKLEEIVNGNLHCYRVTRDSFASAMRKGITAAQVLRFLS
LRAHPSMLRRHGEREENGDTTSPSSAGGASSSFTFSASPRRRAVAGTCGSTTSIDAVSTL
VVPQSFCDQMHMWESECRRVVFEHHVVLLRNMSTEQQKAVTAYLIDAGEVDAVAHAERGY
MVIREEVFERLVAPLLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagctcctcggcattggacgtgccgcttgtagaagtcatctgcagctatccg
acccgcgaggggctatgcgccgagtgccctgcactgctgctgctcgtctaccagcacgtt
gtagcggagctgcaggcggggcgacgcgccgtggacgtgttccgtggcacctcgcggcag
gaccacctgagcgaattactcggtgtgcgctccttgtcggagctgtttgagcatctctac
ccgctgtcgcagtcttgcaccctcgatgagagcactgcgggctcgcagttctggaggcag
gcacgggctaccttggaggccgcgtgggcgccgccgcacgacgcaaaggcgcgtgccctt
ctcacgcaggtgcgcggccagccgcgattccgcttttgcgggccgcgcgacgccgagacg
cccggggagggctatccactgcaccctgtatcgttggagcgggccttggcaacaagcaag
cgcttcctccgcactgcgatgacctgcgcactggacgggtcaacggatgccctggccggg
cggcaaccggagctgcgcgcggtgctgcagctggcccaccttgttccccatactccgtcg
acgggagcgcctccgagaaaagaagtcacgccggaggggattagcttctgcatggtgtcg
ctgcagcagcggtggtgggtactggtgaacgcggcgctggagcgcgttctgctgctcact
cgcgctgccgcgaatgggaacggtaacaccagcggcagcagcggcgtcacaaaatcgctt
ctctggcagctgctggcggtgctgtctgtcctagacactgcgcactacgtcttcgccttc
ccagaaaggcagcaggatctcgcggctcaccatcttctcgcacggctgtccgaggtcggg
ctggtgtaccccttactcagcaacgaccgcaagtgctttgtcttgagtcctgacttcctg
cacgccattcactggcacgcgagcacgccgctgtccctcaccttcaatcatcacctcctg
cgaagcgttagcggcgtcagcgacatacgtcgcgaggacaccgacaccatcatcaccgaa
acgaacttccgtctgtacgcgtacaccgacgatgctgacctgctcaacattttgaaccag
ttcgcgaagctggaggagatcgtgaacgggaatctccactgctaccgcgtgacgcgggac
agctttgcctccgcgatgcgcaagggcatcaccgctgcacaagtcctacgctttctttcg
ctgcgagcgcaccccagcatgcttcgccggcacggggagcgggaggagaacggtgacacg
acgtcgccatcgtctgctggcggcgcctcctcttccttcactttttcagcgtcccctcgt
cgtagggctgttgcgggcacgtgtgggagcaccacctccattgatgcggtgtcgacgctt
gtggttccgcagtccttctgcgaccaaatgcacatgtgggagagcgagtgtcgccgcgta
gtgtttgagcaccacgttgtcctgctacgcaacatgtcaacggagcaacagaaggcggtg
acagcgtatttgatcgatgcaggggaggtcgatgccgttgcgcacgctgagcgcggctac
atggtgattcgtgaggaagtcttcgagcgtcttgtcgcaccacttttaaggtga
DBGET
integrated database retrieval system
