Limnohabitans sp. 103DPR2: L103DPR2_01749
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Entry
L103DPR2_01749 CDS
T04120
Symbol
mdtC_4
Name
(GenBank) Multidrug resistance protein MdtC
KO
K18138
multidrug efflux pump
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim01501
beta-Lactam resistance
lim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L103DPR2_01749 (mdtC_4)
01503 Cationic antimicrobial peptide (CAMP) resistance
L103DPR2_01749 (mdtC_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lim02000
]
L103DPR2_01749 (mdtC_4)
01504 Antimicrobial resistance genes [BR:
lim01504
]
L103DPR2_01749 (mdtC_4)
Transporters [BR:
lim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
L103DPR2_01749 (mdtC_4)
Antimicrobial resistance genes [BR:
lim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L103DPR2_01749 (mdtC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
AsnC_trans_reg
AsnC_trans_reg_3
DUF6549
Motif
Other DBs
NCBI-ProteinID:
ALK92147
LinkDB
All DBs
Position
1786293..1789379
Genome browser
AA seq
1028 aa
AA seq
DB search
MWVTRVSIARPVFAVMVMIALCVLGIFSYVKLGVEQLPDLNLPIAYVDVLYPGASPQSVE
EEITKKIEEALNGIAGVKRITSRSFEGRSQTSVEFNLNANMARGMQDVRDKIAAVQAAFP
KDAKTPLVLRVNNEASEPVAVIGVLSQSKTHRDVSMLAELQVVRRLQRIDGIAFIKISGN
ATREIRIDLNQQKLRANAVLPIDISNALKAQNQDAPIGLISNDVQDGILRMEGRSKNYLD
LNATVVQQRSGLPVTVADLGNLYLREKELESLARINGQRAISIEVFKQQDANIVSTGEGI
KEALAELKNQIPADVEIRTISLNSDWVKVSLVGVQRTLIEGALLTVAIVLLFLKSWRSTV
ITGLTLPISVISSFIAVQAFGFTLNFMTMMALSLCIGLLVDDAIVVRENIVRHLAMGKSH
VQAALEGTQEIGLAVLATTFAICAVFVPMAFMDGITGRLFFPFGITVVVAVIISLLVSFT
LDPMLSSVWPEPANANLDRVPVLGYLIARVDRFMAGCHASYESLVHWIFDTRKFELVPGL
RLSHRALVLWGAVLSLVIAFLLTKVVGTEFIPQTDRGLIQITMRLPVGSSLPRSSEKLAQ
VEAAIRSVPEVETVVTVIGGSDAGFLVGRNQAAVNIVLKPKHERQRTQKQIEEVLRKLTQ
PISGIEVAIGLDRPIYIAVLGNDAERLAQFSKDFSEKIKSIPGIVDVDLSVKPGLTAYSV
KLDALAIRELGLNASQVAQTLRAYVNGEVATNWLAGDGEQVQVVLRLPELDRQHLVQMHK
LPVAYTKEGQAIELARVARIEPTANPEVIRRQNLMRREAIFASVEGRPAGDVGADVQAMM
KATTPPEGIYFDLQGSTKDQQDAFSAILSAMLMAVLFIYIVLASQFNSFKQPIAIMASLP
LALMGVMLSLWLTQTTLNLFSMIGMVMLMGLVTKNAILLIDFANESRRRGLSVKDALLEA
GQVRMRPIMMTTFAMIFGMLPLALALNEGGELQAGMGRAIIGGVLTSTFLTLVVVPVIYS
YLVKDDAT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtgggttacgcgtgtatcgattgcaaggcctgtctttgcggtcatggtgatgattgcc
ttgtgtgtcctaggcatcttttcttatgtcaagttgggggtagaacaactgcctgatttg
aacttgccgattgcctatgtcgatgtgctttacccaggtgcgtcgccgcaatcggtggag
gaagaaatcactaaaaaaattgaagaagcactcaatggcattgccggtgtgaaacgcatc
acatcacgctctttcgaaggtcgcagccaaaccagtgtcgaattcaatttgaatgccaac
atggcccgtggcatgcaagatgtgcgggacaaaatagcagctgtgcaggccgcatttcca
aaagatgccaaaacccccttggttttgcgcgttaacaatgaggcctcagagcctgtggcg
gtgattggggttttgtcgcaatccaagacgcatcgcgatgtgtcgatgttggcggaattg
caagtggttcgacgtttgcaacgaattgatggcattgccttcatcaaaatttctggcaat
gccacgcgagaaattcgcatcgacttgaaccaacaaaaattgcgtgccaatgctgttctt
cccatagacatcagcaatgccctcaaagctcaaaatcaagatgcacccattggcttgata
tccaatgacgttcaggatggcattttgcgaatggaaggtcggtccaaaaattatttggac
ttgaacgctaccgtggttcagcaacgaagcggattgcctgtgactgtggcagatcttggc
aatctttacctgcgtgaaaaagaacttgaatccttggcgcgtatcaacggtcagcgtgcc
atcagcattgaagtgtttaaacagcaagacgccaacattgtgagcacaggcgagggcatc
aaagaggccttggctgaactcaagaatcaaattcccgcagatgttgaaattcgcacaatc
agcttgaacagcgattgggtcaaggtttcattggtgggcgtccaaagaacgctgattgaa
ggcgctttgttgacggtggccattgtgttgcttttcttgaagtcttggcgaagcacggtg
atcacaggattgaccctgcccatttcggtcatttccagtttcatcgccgttcaggctttt
ggattcacactcaacttcatgaccatgatggctttgtcactgtgcatcggcttgctggtg
gacgatgccattgtggtgcgtgaaaacattgtgcggcatttggccatgggcaaatcgcat
gtccaagcggctctggaaggcactcaagaaattggcttggccgttttggcgacgaccttt
gcgatttgtgctgtatttgtgccgatggctttcatggatggcatcacaggtcgcttgttt
ttcccattcggaatcacggtggttgtcgcagtgatcatctctttgttggtcagttttacc
ttggatccgatgttgtccagtgtttggccagagcccgccaatgccaatttggaccgggtg
cccgtgctcggctatttgattgcgagggtcgatcgtttcatggcaggatgccacgcatct
tacgagtctttggttcactggatttttgacactcgcaagtttgaactcgttccagggttg
aggctgtcgcatcgtgcgttggtgctttggggtgcggtattgagcttggtgattgcattt
ttactgaccaaagtggttggaacagaattcattccacagacagaccgtggactgattcaa
atcaccatgcgcttgccggtggggtctagcttgccacgcagtagcgaaaagttggcccaa
gttgaggcggccattcgatctgtgcctgaagttgaaacggtggtgaccgtgattggtggc
agtgatgctggatttttggtgggtcgaaatcaggcggccgtcaacattgtcttaaaaccc
aaacatgaacggcaacgcacgcaaaagcaaattgaagaagttcttcggaagttgacgcag
cccatctcaggcattgaagtggccattggcttggacaggccgatctacattgcggtgttg
ggcaacgatgccgaacgtttggcgcaattcagcaaagacttttctgaaaagatcaaaagc
attccaggcattgtggacgtggacctttccgtcaagcctggactgacagcctacagcgtc
aaactggatgcattggccattcgtgaactgggcttgaacgcttcgcaagtggcgcagacg
ctgagagcctatgtcaatggtgaagttgccacaaactggctggcaggtgatggtgagcag
gttcaggtggtcttacgtttgcctgaactcgatcgtcagcatttggtgcaaatgcacaaa
ttgcccgttgcgtataccaaagaaggccaagccattgaattggccagagtggcgcgcatt
gaacccacagccaacccagaagtgatcaggcgccaaaacttgatgcgccgcgaagccatt
tttgcaagtgttgaaggccgtccagctggtgatgtaggcgctgatgttcaagccatgatg
aaagccactacaccgccggaaggcatttactttgatttgcaaggatcgaccaaagatcag
caagatgcattctcggccatcttgagtgccatgttgatggccgtgcttttcatttacatt
gtgttggccagtcaattcaacagtttcaaacagccgattgccatcatggcatcgctgcct
ttggccttgatgggcgtgatgctttctttgtggctcactcaaacaacattgaacttgttc
tccatgattggcatggtgatgctgatgggcttggtgaccaaaaacgccattttgttgatc
gactttgccaatgaatcgcgcaggcgtggcctttcagtgaaagatgcattgcttgaagct
ggacaggttcgcatgcgacccatcatgatgaccacctttgcaatgatatttggcatgctg
cccttggccttggcgctgaacgaaggcggtgaattacaagcaggcatgggacgcgccatc
attggtggtgtattgacgtctacttttttaaccttggtggtggtgcccgtgatttactct
taccttgtcaaagacgatgcgacttaa
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