KEGG   Limnohabitans sp. 103DPR2: L103DPR2_02727
Entry
L103DPR2_02727    CDS       T04120                                 
Symbol
nrdA
Name
(GenBank) Ribonucleoside-diphosphate reductase 1 subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim00230  Purine metabolism
lim00240  Pyrimidine metabolism
lim01100  Metabolic pathways
lim01232  Nucleotide metabolism
Module
lim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lim_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:lim00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    L103DPR2_02727 (nrdA)
   00240 Pyrimidine metabolism
    L103DPR2_02727 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_02727 (nrdA)
Enzymes [BR:lim01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     L103DPR2_02727 (nrdA)
DNA repair and recombination proteins [BR:lim03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    L103DPR2_02727 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: ALK93105
LinkDB
Position
2806800..2809712
AA seq 970 aa
MQIELNPTSNPQGFLGANDASTASAAAPHALANYQIIRRNGAVVPFEPNKIAVALMKAFL
AVHGTQGAASASVREVVDGLTQNVVRALMRSRPGGGTFHIEDVQDQVELGLMRSSNHEVA
RAYVLYRERRTQERAQVKEEKAAVSAHPTLHVLDGGQRVPLDVNYLQGLIVNACHGLGQD
VHPDPIVAETMRNLYDGVPMEEVYKASILASRTLIEKDPDYTYVTARLLMHTIAKEVLGQ
EVLLKDMASHYVDYFPGYIKKGVDNGLLDEKLLQFDLRKLATALKAERDLQFDYLGLQTL
YDRYFLHVRKTRIELPQSFFMRVAMGLALNEADREARAIEFYEVLSSFDFMSSTPTLFNS
AGLRSQLSSCYLTTVPDDLDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGES
QGVVPFLKVVNDTAVAVNQGGKRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNT
ANWIPDLFMRRVMEKGTWTLFSPSDCPDLHDKFGVEFEKAYVAYEQKAAAGEIKPSRTIQ
ANDLWRKMLSMLFETGHPWITFKDACNIRSPQQHAGVVHSSNLCTEITLNTSDTETAVCN
LGSVNLPQHLMDGPNGKQIDHAKLQRTIKTAMRMLDNVIDINYYAVKKARDSNMRHRPVG
LGLMGFQDALYQMRVPYASQEAVQFADTSMEAICYYAYWASTELAAERGKYSSYKGSLWD
QGILPLDTLNLLEKARGGYVEVDRSSTMDWDALRKKIAKDGMRNSNCVAIAPTATISNII
GVDACIEPCFGNLSVKSNLSGEFTIINSYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDR
VPQEIKALYATAFEVETTWIVEAAARRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWLRG
LKTTYYLRTISATHAEKSTVSNNQMNAVSSGSSTGGVSASSASAPAQFSGVPATDVKFTA
IDDVGCEACQ
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgcaaattgagctaaatccgacatcgaacccccaaggcttcttgggtgccaacgatgca
tccaccgcatcggctgcggcaccccatgctttggccaactaccaaatcattcgccgcaat
ggcgctgtggtgcccttcgagccgaacaaaattgcggttgccttgatgaaagcctttttg
gcggttcacggtacgcaaggtgcggcttctgccagcgtgcgagaagtggtggacggcctc
acccaaaacgtggtgcgcgccctgatgcgctcacgtcctggtggcggcaccttccacatt
gaagacgtgcaagaccaagttgagctgggcctgatgcgcagcagcaaccacgaagtcgct
cgtgcctatgtgctctaccgtgaacgtcgcacccaagaacgcgcccaagtcaaagaagaa
aaagccgcggtcagtgcccaccccaccttgcacgttttggacggcggccagcgcgtgccc
ctcgacgtcaactatttgcaaggcctcatcgtcaatgcttgccacggtttgggccaagac
gtccatcccgatcccatcgtggccgaaaccatgcgcaacctctacgacggcgtgcccatg
gaagaggtttacaaggcgtccatcttggcgtctcgcaccctgatcgaaaaggatcctgac
tacacctacgtcacagcccgtctcttaatgcacaccattgccaaagaagttttgggccaa
gaggtgctcttgaaggacatggcttctcactatgtggactacttccctggctacatcaaa
aagggtgtcgacaacggcttgctcgacgaaaaactcctgcaatttgacctgcgcaagctg
gccacagccctgaaagccgagcgcgatctgcagttcgattacctcggcctgcaaactttg
tacgaccgctacttcttgcacgttcgcaaaacacgcatcgagttgccccagtctttcttc
atgcgcgtcgccatgggcctggccctgaacgaagccgaccgcgaagcccgcgccatcgag
ttctacgaagtcctgtcttcattcgacttcatgtccagcacccccacactgtttaacagc
gcaggtttgcgctcacagctgtccagctgctacctcaccacggtgcctgacgacctcgac
ggcatctacgagtccatcaaagaaaacgctttgctgtctaaatttgcaggcggcttggga
aacgactggacgcgcgttcgtgctttgggcagccacatcaagggcaccaatggcgaatca
caaggcgtggtgcctttcctcaaagtggtcaacgacaccgctgtggcggtcaaccaaggc
ggcaagcgcaaaggtgcggtctgtacttacctcgaaacttggcacctcgacattgaagag
ttcctggaactgcgcaagaacaccggcgacgaccgccgccgcacgcacgacatgaacacc
gccaactggatccccgacttgttcatgcgccgtgtcatggaaaaaggcacttggactttg
ttctcgccttccgattgccccgatttgcacgacaagtttggcgttgagttcgaaaaagcc
tacgtggcttacgagcaaaaagctgccgccggcgaaatcaagcccagccgcaccatccag
gccaacgacctgtggcgcaaaatgctctccatgctgttcgaaacaggccatccttggatc
actttcaaagatgcttgcaacattcgttcacctcagcagcatgctggcgtggtgcactcc
tctaacttgtgcaccgagatcaccttgaacaccagcgacaccgaaacagcggtgtgcaac
ttgggttcggtcaacttgccacagcacttgatggacggccccaacggcaaacaaatcgac
cacgccaaactgcagcgcaccatcaaaacggccatgcgcatgctcgacaacgtgatcgac
atcaactactacgcggtcaaaaaagcgcgtgactccaatatgcgtcaccgccccgtgggc
ttgggcctcatgggcttccaagacgcgctgtaccaaatgcgtgtgccttatgcctcccaa
gaagccgtgcaatttgccgacacgtccatggaagccatctgctactacgcttactgggct
tctaccgagttggctgccgagcgtggcaagtactctagttacaaaggttctttgtgggac
caaggcatcttgcctttggacaccctcaacctgctggaaaaagcccgcggtggttacgtt
gaagtcgaccgcagcagcaccatggactgggatgctttgcgcaagaagattgccaaagac
ggcatgcgcaactccaactgcgtggccattgcgcctaccgccaccatctccaacatcatt
ggtgtcgacgcttgtatcgagccttgcttcggcaatttgtccgtcaagtccaacttgtct
ggcgagttcaccatcatcaacagctacctggttcgcgatttgaagcgcctcggtctgtgg
gacgatgtcatggtcatggacttgaagcacttcgacggctcattgcgccccatcgaccgt
gtgccacaagaaatcaaggccttgtacgccacggccttcgaagtggaaaccacatggatt
gtggaagctgctgcacgtcgccaaaaatggattgaccaagcccagtcgctcaacatctac
atgtcgggcgcgtcgggtaaaaaattggacgacacctacaagctggcttggttgcgcggt
cttaaaaccacttactacctgcgcaccatcagcgccacacacgccgagaaatcaactgtg
tcaaacaaccagatgaatgcggtgtcttctggctcttcaactggcggcgtatctgcatcg
agtgcatctgcacccgcacagttctcaggtgtgcctgcaaccgatgtgaagttcacagcc
atcgacgatgttggctgcgaagcttgccaataa

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