Limnohabitans sp. INBF002: LINBF2_17820
Help
Entry
LINBF2_17820 CDS
T09962
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00900
Terpenoid backbone biosynthesis
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LINBF2_17820 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
limi01006
]
LINBF2_17820 (ispA)
Enzymes [BR:
limi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LINBF2_17820 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LINBF2_17820 (ispA)
Prenyltransferases [BR:
limi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LINBF2_17820 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDU53547
LinkDB
All DBs
Position
complement(1816896..1817840)
Genome browser
AA seq
314 aa
AA seq
DB search
MDTHVSASMPHDMTSTELDQWSNHWLAVVEEALSGWISPQAPAGLGDAMRYAVLDGGKRL
RPLLVLAAREAVAHGSKDAALDEAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTV
HVQFGEAQALLAGDALQALAFEFLTPESSAIPDGVQARLCRLLATSAGHAGMAGGQAIDL
ASVGVALNEDQLRQMHRLKTGALLEGSVMMGAACGETTPQALSGLKRYGQALGLAFQVVD
DILDVIADSATLGKTAGKDAANDKPTYVSLLGLEEAKSYAQSLLREALDALRSTGLTHTH
TLAALAERVVNRNT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggacacccacgtgagcgcctccatgccccatgacatgacatccaccgaactcgaccaa
tggagcaaccactggttagccgtcgtcgaagaagctttatctggctggatcagcccgcaa
gcccctgcaggcttgggcgatgccatgcgttatgccgtgctcgatggcggcaaacgcttg
cgccccttgttggtgctggcggcgcgtgaggcagtggcccacggttcaaaagatgcggcg
ttagatgaagcggctttgcgggccgcgtgtgcggtggaattgattcacgcctactcattg
gtacacgatgacatgccttgcatggacaacgatgtgctgcgtcgtggcaaacccaccgtg
catgtgcagtttggcgaagcccaagccttgctcgcgggggatgctctgcaggctttggcg
tttgaatttctcacgcctgagtcttcagccattcccgatggcgtacaagcgcgtttgtgt
cgcttgctcgccacctcggcagggcatgcaggcatggcgggtggtcaggccattgactta
gccagcgtgggcgtggctttgaacgaagatcagttgcgtcagatgcaccgcctgaaaact
ggggccttgttagaaggcagtgtcatgatgggcgcggcctgcggagagaccacaccacaa
gcattgagcggcctcaaacgctatggtcaagccttgggcttggcttttcaagtggtggac
gatattttggatgtcatcgccgattcagccacgcttggtaaaaccgcaggcaaagacgct
gcgaacgacaaacccacctatgtgtccttgttgggtttggaagaagcaaagtcatatgcg
cagtcgttgctgcgcgaggcgttagacgccttgcgtagcacaggcttgacgcacacccac
acgctggccgccttggctgagcgtgtggtgaaccggaacacgtga
DBGET
integrated database retrieval system
