Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_10170
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Entry
JL53_10170 CDS
T03402
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL53_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_10170
Enzymes [BR:
lio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL53_10170
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JL53_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
T2SSE
AAA_30
ADDB_N
SLFN-g3_helicase
AAA_19
ATPase_2
DUF3638
PIF1
Zot
DUF1236
Viral_helicase1
zinc-ribbons_6
zf-CHY
THP2
Motif
Other DBs
NCBI-ProteinID:
AIS63052
LinkDB
All DBs
Position
complement(2079693..2082086)
Genome browser
AA seq
797 aa
AA seq
DB search
MINIAKVIVDVPAMQVDRPFDYFIPEDLEELIRPGMRVSVPFGNRKIQGFVTELGETEEN
PKLKGIDGVMDLAPVLNGELMELGDWLAEDTLSFRVSAYQAMLPAALRAKYEKYFLRLDE
ENTELVQLFEGYETLDWKVAEARNLLKSLGKWVREGSVEVVYQVKNKTTNKKIRMINSLK
SPHELMELIENMPKNAKAQTRVLAFFQIFEGTEISAAELKKQAETSEATIKKLAEQGIIS
IQEKIVSRDPYKHHHFEKSEALTLLPDQQTACEKIIEAKKQETFLIHGVTGSGKTEIYLQ
TIEAKLKEGKEAIVLVPEISLTPQMVERFKSRFGSEVAVLHSALSSGEKYDEWRKIERKE
ARVVVGARSAVFAPFENLGIIIIDEEHEASYKQEDNPRYHARDVAIWRAMKYQCPVVLGS
ATPSLESFARAKKGVYTLIELPSRVNDRAMPEVSVVDMREELRKENRTEFSTELLEKIKD
RIAKKEQTVLMLNRRGYSSFVMCRDCGYVVECPNCDISQTYHQASNKMKCHYCGHEEPVP
QKCPSCEGEHIRYFGTGTQKVEESLTKLIPEARVIRMDVDTTRTKGAHEKLLRSFRNHEA
DILLGTQMIAKGLDFPDITLVGVLNADTMLHLPDFRASERTFQLLTQVSGRAGRHERTGE
VVVQSYNPEHYSIEFAKKHDFIGFYHHEMQLRKMGAYPPFYYLTMINVSDENEMKAIRTI
QEMVNFLRGKLGPEAVILGPVPSTIARIKNKYRYQCIIKYKIEPNLKQELKTLITHYQKD
QQKGLTINIDVQPYVLM
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatagcaaaagttattgtggatgttccagccatgcaagtggaccgtccgttt
gattactttattccagaagatttagaagagcttattagaccaggaatgcgcgttagtgtt
ccttttgggaatcgtaaaatacaaggctttgtcacagaacttggtgaaacagaagaaaat
cctaagctaaaaggtatcgacggggtaatggatttagcgccagttttaaatggggagtta
atggagcttggtgactggttggctgaagacacacttagttttcgagtgtcggcctatcaa
gctatgttaccagctgcattacgggcaaagtacgaaaaatactttctacggctagacgag
gaaaacaccgaattagtgcagctatttgaaggttatgaaacgcttgactggaaggtagct
gaagcacgtaacttattaaaatcacttggcaaatgggtccgagagggcagcgtagaagtt
gtctaccaagtgaaaaataaaacgacgaataaaaaaatccgaatgattaactccttaaaa
tcccctcacgaactaatggaactaatagaaaacatgccgaaaaatgctaaagcgcaaaca
cgtgtgctagcttttttccaaatatttgaaggaacagagatttctgctgctgaattaaaa
aaacaagcagaaacatccgaagcaactatcaaaaaacttgctgaacaaggaattatttct
atccaggaaaagatcgtttcgcgcgatccatataagcaccaccattttgaaaaaagtgaa
gcattgacgcttttacctgaccaacaaacggcttgtgagaaaattatcgaagccaaaaaa
caagaaacttttttaattcatggggttactggtagtggaaaaaccgaaatttacttacaa
actatcgaagcaaaattaaaagaaggaaaagaagccatcgtgttagttccggaaatttct
cttacaccacaaatggtagaacgattcaaaagtcggtttggaagtgaagtagctgtcctt
catagcgcactttcttccggagaaaaatacgatgaatggcgcaaaattgaacgaaaagaa
gctcgagtagttgttggggctcgttccgctgtctttgctccatttgaaaacttaggcatt
attatcattgatgaagaacatgaagctagttataaacaagaagataatccacgttaccat
gcgcgcgatgtagcgatttggcgtgcgatgaaatatcagtgcccggttgttctcggaagc
gccaccccgtctcttgaatcttttgcacgggccaaaaaaggtgtctacacacttatcgaa
ctaccaagccgagtaaacgatagagcaatgccagaagtaagtgtggtcgacatgcgagaa
gagttgcgcaaagaaaaccgtaccgaattttccacggaactactggaaaaaattaaagat
cgcatcgcaaaaaaagaacaaacggtactcatgctcaaccgccgtggttattcttcgttt
gtgatgtgccgtgattgtgggtacgtagttgaatgcccaaactgcgatatttcacaaacg
tatcaccaagcaagtaacaaaatgaagtgtcattactgtggccatgaagaacctgtccca
caaaaatgtccaagctgtgagggcgaacacattcgctacttcggaaccggtacacaaaaa
gtagaagaaagtctaaccaaactcattcccgaagcgcgagtgattcgaatggacgttgac
actaccaggacaaaaggcgcccatgaaaaattgctgcggagcttccgtaatcatgaagca
gatattttgctcggtacacaaatgattgccaaaggactagattttccagatattacttta
gtgggagttttaaatgcagatacgatgcttcatttaccagacttccgagcctccgaacga
actttccaactgctgacacaagtaagtggacgagctgggagacatgaaagaacaggtgaa
gtagttgttcaaagctataaccccgaacattacagtattgaatttgcgaaaaaacacgat
ttcattggtttttatcatcatgaaatgcaactcagaaaaatgggtgcatatccgccattt
tactatttaacaatgattaacgttagtgatgaaaatgaaatgaaagctatccgtacaatt
caagaaatggtcaattttctgcgcgggaaattaggtccggaagcagtgattcttggtcca
gttccaagcacaattgcccgtattaaaaataaataccgttatcagtgtattattaaatat
aaaattgaaccaaatttaaaacaagagctaaaaaccttaataacccattaccaaaaagac
caacaaaaagggttaaccattaacatcgacgtacaaccttatgtattaatgtaa
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