Lactobacillus intestinalis: KBW87_01570
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Entry
KBW87_01570 CDS
T08339
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KBW87_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liq03021
]
KBW87_01570
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_01570
Enzymes [BR:
liq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KBW87_01570
Transcription machinery [BR:
liq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KBW87_01570
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KBW87_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
DUF961
Motif
Other DBs
NCBI-ProteinID:
UTW40612
LinkDB
All DBs
Position
315633..316571
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFATVPGVREDVTKIILNLKKLELKSLSDEQKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMQIAVKNGRGYVPASDNKSEDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTLEIWTDGSIKPNDALSFAAKILVEHFKVFESADANTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTEADMMRVRNLGRKSLEEVKNK
LADLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgaaagaggctttggtacaactttaggtaattctttacgtaga
gttttacttacttctattccaggtacaggacttgtttatgtacaaatcgatggcgtttta
cacgagttcgcaacagttcctggcgtaagagaagatgtaactaagatcattctgaattta
aagaaacttgagttaaagtctctttcagatgaacaaaaagttattgaattggacgttgaa
ggtcctgccactgttactgctgatgatcttaaagttgatgcagacgttcaagttttgaac
ccggatcaatatatttgtaccattgctgaaggtggacatttgcatatgcaaatcgcagtt
aagaatggccgcggttatgttcctgcaagtgacaataagagtgaagacatgccaattggc
gttattcctgttgattcacttttctcaccaattaaaaaggttaactatcaagtagaatca
actcgtgttggtaagagagacgattttgacaagctcactttagagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgcagctaaaattttggtagaacactttaaa
gtgtttgaatctgcagatgcaaatactaaatttagcgaagttatggtggaaaaagaagac
gataagaaggaaaagaagcttgaaatgactattgaagagcttgacctttcagttcgttct
tataactgccttaagcgtgcgggaattaatactttgcaagagttaactgataaaactgaa
gcagatatgatgcgcgtacgtaacttaggacgtaaatcattggaagaagttaagaacaaa
ttagctgacttaggactttcacttcgtcaagaagattaa
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