Lichenihabitans sp. PAMC28606: LGH83_13240
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Entry
LGH83_13240 CDS
T07621
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03420
Nucleotide excision repair
liz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGH83_13240
03430 Mismatch repair
LGH83_13240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_13240
Enzymes [BR:
liz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGH83_13240
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGH83_13240
MMR (mismatch excision repair)
Other MMR factors
LGH83_13240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UDL93543
LinkDB
All DBs
Position
2809125..2811491
Genome browser
AA seq
788 aa
AA seq
DB search
MADQIPAEAGPRPRPGGIAERARAAAAPAAAYLKNLNLEQQAAIEALDGPVLVLAGAGTG
KTRVLTTRIAHIVATGRARPHEILAVTFTNKAAREMKERVAALIGPAAEGMTWLGTFHSI
STKIIRRHAELVGLKSSFTILDTDDQIRLMKQVLQAENVDDKRWPARALSFQIDAWKNRG
LEPSKVPAGEASAFANGKGGLLYAAYQARLKQLNAADFGDLLLEGLRLLRDHPDVLAQFQ
GRFKYMLVDEYQDTNVVQYLWLRLLAQATQNLCCVGDDDQSIYGWRGAEVENILRFEKDF
PGATVVRLERNYRSTGHILGTAAHLIAQNEGRLGKTLFTDDELGEKPTVTGVWDSEEEAR
QVGDEIERLQRRGQSLDEIAILVRASFQMREFEERFITLGLPYKVIGGPRFYERLEIRDA
LAYLRCVAQPADDLAFERIANTPKRGLGDATLQVLHDYGRRQGVPMMQATRELVETEDLK
PKQRQTLRALLGDFERWATLIPTLHHSRLAETILEESGYTDMWTKDRTAEAAGRLDNLKE
LVRSMEDFESLASFLEHISLVMDTDTANEGPRVSIMTLHGAKGLEFDTVFLPGWEEGLFP
SQRSMDENGRAGLEEERRLAYVGVTRAKRRAKIFFATNRRIHGLWQTTIPSRFVDELPEA
HVEVTEAAQATRYGGYGASRFDTMKGFASSYDTPGWQRAQKGAAERAASGFAERGSGFGK
IGRGGPMLIEGELVAKSSVASSYTAGARVFHQKFGPGTVAQVDGNKLTVDFDKAGRKMVL
EGFVSPAG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ttggccgaccagatccccgccgaggctgggcctcgcccgcgaccgggcggcattgccgag
cgggctcgcgcggcggcggcccctgcggcagcctatctcaaaaatctcaatctggagcag
caggccgccatcgaagcgttggatgggcctgtgctggtcttggcgggagccgggacgggc
aagacgcgtgtgctgacgacgcggatcgcccatatcgtagcgaccggccgggcgcggccg
catgagattttggccgtgaccttcaccaacaaggccgcgcgcgagatgaaggagcgggtg
gccgccctcatcggtccggccgccgaaggcatgacgtggctcggcacgttccattcgatc
tcgaccaagatcatccgccgccacgccgaattggtcgggcttaaatccagcttcacgatc
ctcgataccgacgatcaaatccggctgatgaagcaagtgctgcaggctgagaatgtcgat
gacaagcggtggcccgcccgcgccctctcgtttcagatcgatgcctggaaaaatcgcggc
ctcgagccctccaaggttccggccggcgaggcaagcgccttcgccaacggcaagggcgga
cttctctatgcggcctatcaggcgcggttgaagcaactgaatgcagccgattttggcgac
ctgctgctcgaaggcttgcggttactccgggaccatccggatgtgctggcgcagttccag
ggtcgtttcaaatatatgctggtggacgagtaccaggacaccaatgtggtgcaatatctg
tggttgcgtctgctcgcgcaggcgacccagaatctgtgctgtgtcggcgatgacgatcaa
tcgatctatgggtggcgcggtgccgaggtcgaaaacattctgcggttcgagaaggatttt
ccgggcgcgaccgtggttcggctggagcgcaactatcgttcgaccggccatattctcgga
acggccgcccatctgatcgcacaaaacgaggggcggctcggcaagaccttgttcaccgac
gacgagttgggcgagaagcccaccgtcaccggcgtgtgggattctgaagaagaagcgcgg
caggtcggcgacgagatcgagcgattgcagcgccgtgggcaatcgcttgacgagatcgcg
atccttgtccgggcctcgtttcagatgcgagaattcgaggagcggttcatcacgctcggc
cttccctataaggtgatcggcggcccgcgtttctacgagcggctcgaaattcgcgatgcc
ctggcttacctgcgctgcgtggcgcagccggctgacgatcttgcgttcgagcggatcgcc
aacacgccgaagcgtgggctcggcgatgccacgctccaggtgttgcacgattacggtcgc
cggcagggcgtgccgatgatgcaggccacccgcgaactcgtcgagaccgaggatctcaag
cccaagcagcggcagacactgcgggccttgcttggcgacttcgagcgctgggcgaccctg
atcccgacgctgcaccatagtcgcctggccgagaccattctggaggaatccggctacacc
gacatgtggacgaaagaccgcaccgcggaagcggccggacggctcgacaacctcaaggaa
ctcgttcgctccatggaggatttcgagagccttgcctcgttcctcgaacatatttcgctg
gtgatggataccgatacggccaacgaaggcccgcgcgtgtcgatcatgacgctgcatgga
gccaaggggctcgaattcgataccgtgttcctgcccggctgggaggaagggttgtttccc
tcccaacgctcgatggacgagaacgggcgggccggccttgaggaggagcgccgcctcgct
tacgtcggcgtcacacgggcgaaacggcgcgccaagatcttctttgccaccaatcgccgt
attcatggcctgtggcagaccaccattccgtcgcgcttcgtcgatgaattgcccgaggcc
catgtcgaggtgaccgaagccgcgcaagccacccgctatggtggctatggcgcctcgcgc
ttcgacacgatgaaggggtttgcgtcgagctacgacacgccgggctggcagcgcgcccag
aagggcgcggcggagcgggccgccagcggctttgccgagcgaggctccggattcggcaag
atcggacgcgggggacccatgctgatcgaaggcgagttggtggctaaatcctcggtcgcc
tcgtcctatacggccggggcgcgggtgttccaccagaagttcgggcccggcactgtggcg
caggtcgatggcaataagctgacggtcgatttcgacaaagcgggtcgcaagatggtgctg
gaagggttcgtcagcccggcggggtga
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integrated database retrieval system
