Lotus japonicus: 130711717
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Entry
130711717 CDS
T04348
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130711717
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130711717
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130711717
NCBI-ProteinID:
XP_057417419
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Position
4:59827758..59830548
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AA seq
434 aa
AA seq
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MEATKLRLLLFFVLYLVAFPTLRANIAQFDQVWQERSQHAKSAALQAYRPNPEQVTVDFN
KHVNENMNGSNNTRRGLTSKYTGPCTATNPIDSCWRCDPNWEKNRKKLADCAMGFGHGTT
GGKAGKIYVVNDPSDHELINPKPGTLRHAAIQKEPLWIIFAHDMTIKLSAELLLTDDKTI
DARGANVHISHGAQITMQYVKNIIIHGLHIHDIKKSGGGMIRDSVNHVGVRTQSDGDGIS
MFGATHVWIDHISLSNCDDGLVDAVEGSTAITISNCHLTHHNDVMLFGASDVFSGDKVSQ
ITVAFNHFGQGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSHPTIISQGNRFIAPQNS
AAKEVTKRDYAPESVWKSWNWRSEGDLMMNGAFFVESGSKVANIKTDIVAKPGTFAASLT
RFAGALKCVVNKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaccaagcttagattgctcttattttttgtattatatcttgttgcattccct
accctgagggctaacatagctcaattcgaccaagtttggcaggagcgatctcagcatgcc
aaaagtgcagcactacaggcttataggccaaaccctgagcaagttactgttgatttcaat
aagcatgtgaacgagaatatgaatggctccaacaacacaaggaggggtttaacatccaag
tacacaggtccatgcacggccacaaaccccatcgacagttgttggagatgtgatccaaac
tgggaaaagaaccgcaagaagctagcagattgtgccatgggtttcggtcacggcacaacc
ggaggcaaagccggcaaaatctatgttgtcaatgacccctccgaccatgaactcatcaac
ccaaaaccagggacattaagacacgctgcaattcaaaaggaaccattgtggatcattttt
gcacatgacatgaccatcaaactaagtgcagagctcctactaactgatgacaagaccata
gatgcacgcggcgcaaacgttcatatcagtcatggtgctcaaatcacaatgcagtatgtg
aaaaacataatcattcatggtttgcacattcatgatatcaaaaaatctggtggtggcatg
attagggactcggtgaatcacgttggagtccgcacgcagagtgatggtgatggaatttca
atgtttggagctactcacgtttggattgatcatatttctttgtccaattgtgatgatggt
ctagttgatgctgtggagggatcaacagctatcaccatctctaattgccacttgacccat
cataatgatgttatgttgtttggagcaagtgatgtgttttcaggagataaagtgtcgcaa
ataaccgtggctttcaaccattttgggcaaggactggtacagaggatgccaaggtgcagg
tggggtttctttcacgttgtcaacaatgactacactcactggctaatgtatgccattggt
ggtagctcacatcccaccatcattagccagggtaatcgctttattgctcctcaaaactca
gctgctaaggaggtgacaaagagagattatgcacctgaaagtgtgtggaagtcatggaat
tggagatcagagggtgacttaatgatgaacggagccttctttgttgagtctggaagtaag
gtcgcaaacatcaaaacagacattgttgcaaagcctgggacctttgcagcaagcctaact
cgctttgcaggtgctctaaaatgtgtagtaaataagccatgctga
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