Lotus japonicus: 130720485
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Entry
130720485 CDS
T04348
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130720485
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130720485
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130720485
NCBI-ProteinID:
XP_057427118
UniProt:
I3T7N6
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Position
5:complement(67308548..67311412)
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AA seq
331 aa
AA seq
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MASMLPYGDVDSTLRALAGQAEGFGRNAIGGLHGPLYLVTTLADDGPGSLREGCRRKDPL
WIVFQVSGTIHLQSYLSVSSYKTVDGRGQRIKFTGKGLRLKECEHIIVCNLEFEGGRGHD
VDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCHFASHDKTMLIGADPSHV
GDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYE
AGTKKKTFEFYTEKAADKEEQKTGFLISEGDMFLNGAQPCLPTEYKEESMFHPSEYYPTW
TMEAADNSLRDILQLCTGWQSICRPEDHTTI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgatgctgccatacggcgatgtagattccactttgagggccttggccggtcaa
gcagagggtttcggccgcaacgctatcggtggtctccatggtcctctctatttggtcacc
acccttgcagatgatggtcctggttcccttcgtgagggatgtcgaagaaaggatcccctg
tggattgtttttcaagtttcgggcacgattcatcttcagtcatacttgagtgtgtcatct
tataagactgtagatggcagaggccagaggataaaatttactgggaagggattaaggctg
aaagaatgtgagcacataattgtatgcaatcttgagtttgagggtggtaggggtcatgat
gtggatggcattcaaatcaaacctaattctaggcacatatggattgatcgatgcagcctt
cgtgattatgatgatgggcttatagacattacaagacagagcacagatatcactatatct
agatgtcactttgcatcacatgacaagaccatgctaattggagctgatccatctcacgtt
ggcgatcgatgcatccgggtgaccattcatcattgtttctttgacggaacccggcaaaga
caccctcgtgtgagatttggaaaagttcatctgtacaacaattacaccagaaactgggga
atatatgctgtttgtgctagtgttgagtcccagatatactctcaatgcaacatatatgaa
gctggaactaagaaaaagacttttgagttttatactgaaaaggcggcagataaggaagag
cagaagactggcttcttaatatctgaaggagacatgtttctgaatggtgctcagccatgc
ttacctacagagtacaaagaagaatccatgttccatcctagtgagtattacccaacatgg
actatggaagcagctgataattctctcagagatatcctccagttatgtacaggttggcag
tccatttgtaggccagaagaccatacgaccatctaa
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