Lotus japonicus: 130722104
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Entry
130722104 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130722104
KO
K18735
protein SMG9
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130722104
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130722104
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_18
RsgA_GTPase
AAA_16
MeaB
AAA_22
URGCP_GTPase
DO-GTPase2
FeoB_N
LppC
AAA_17
AAA_30
Motif
Other DBs
NCBI-GeneID:
130722104
NCBI-ProteinID:
XP_057428715
LinkDB
All DBs
Position
6:46550517..46554320
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AA seq
396 aa
AA seq
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MAGSEPSPSPKILLAKPGLVTGGPVAGKFGRGAAGEDDSAQHRSRLPSVASLNLLSDSWD
FHIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFATQSEENRAM
ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMMRPDGSSTVSVLSGESMSAELAHEIM
GIQLAVLLASVCHILLVVSEGVHDDCMWHLMLTVDLLKHGIPDPSLLASSHSQSSSSGHE
KDNKLSGREYMATPVFVHTKLHDQEFTPKNFVQLRKTLIQYFKPSSFVREHAEHKPEEHI
SSSMVHDSPMDSNVPSLFAIPFKKKDENPRAQHGSYISALWKLRDQILSMKSPSFTRPVS
EREWLKNSAKIWEQVKNSPTMLEYCRTLQQSGMFRR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctctgagccctctccttctccaaaaatccttctagcaaagcccggtctcgtt
accggaggccccgtcgccggcaagttcggccgcggcgccgccggcgaagatgattccgcc
cagcaccgttctcgtctcccttctgtcgcatccctcaaccttctctccgattcctgggac
ttccacatcgatcgctttctcccctttttgactgaaaacacggacttcactgtgattgga
gtgattgggccaccaggagttggcaagtccactataatgaatgaactttatggctttgat
tcaagttcccctgggatgctaccaccttttgctacacagtctgaagagaatagagcaatg
gcaaggcattgttctacgggcattgaaccgaggatatctgctgaacgtattattcttctt
gatactcagcctgtatttagtgcttctgttttagctgagatgatgagaccagatggctct
tcaacagtttcagtgctaagtggagaatccatgtcagctgaattggctcatgaaattatg
ggtattcagcttgctgttcttctagcatccgtatgtcatattctgctggtggtgtcagag
ggagtccatgatgattgcatgtggcatttgatgttgacggttgacttgttgaagcatggc
attccagacccatccttacttgcttcatcccattcacagagctctagttcagggcatgag
aaagataacaaactttctggacgtgaatacatggctactcctgtttttgtccacaccaag
ctgcatgatcaagagtttactcctaaaaattttgtacagttgaggaagacactcatacag
tacttcaaaccgtcttcttttgtgagggaacatgccgaacacaagcccgaggagcatatt
tcatcttctatggttcatgatagtcctatggattctaatgtgccaagtttgtttgcaatc
ccatttaagaaaaaggatgaaaatccgagagctcagcatggaagttacatttcagcacta
tggaaattacgggatcagatattatccatgaagtcaccatctttcactagacctgtgtct
gagcgtgaatggttaaaaaattcagccaagatatgggaacaggtaaaaaactccccaacg
atgttggagtactgcagaacacttcaacaatcgggtatgtttaggaggtga
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