Lotus japonicus: 130722496
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Entry
130722496 CDS
T04348
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130722496
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130722496
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
130722496
NCBI-ProteinID:
XP_057429224
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Position
6:complement(2567572..2572831)
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AA seq
452 aa
AA seq
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MAISSSSSAKLVLLACFLLLLAASAMAAPRFFSSQLRNGEAEVETHRLASFNDSTMAVRA
KEAEELNERAAVANPEEVASMVAMNIHNSTERRKLGYFSCGTGNPIDDCWRCDPNWQQNR
KRLADCGIGFGRNAIGGRDGKFYVVTDSRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMV
ITLKQELIMNSFKTIDGRGANVHIANGGCITIQYVTNVIIHGLHVHDCKPTGNAMVRSSP
THFGWRTMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVI
LLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGNP
TINSQGNRYNAPLNPFAKEVTKRVETAQTEWKGWNWRSEGDLLLNGAYFTPSGAGASASY
ARASSLGAKSSSMVGTMTSNAGALGCRRGRSC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcttcttcttcttctgcaaaactggtcctccttgcttgcttcttgttgctc
cttgctgcttcagcaatggccgcaccacgcttcttctcttctcagctcaggaatggtgaa
gctgaagttgaaacgcacaggctagcgagcttcaacgactcaacaatggcggtgagggca
aaagaagctgaggaattgaatgagcgtgctgcggtggctaacccagaggaggttgcttca
atggttgcgatgaacattcacaacagcactgaaagaaggaagctgggatatttctcctgt
ggaactggtaaccccattgatgattgctggcgttgtgaccccaactggcagcaaaacagg
aagcgccttgccgactgtggtattggttttggcagaaacgccattggtggccgtgatgga
aaattctatgttgtcactgactccagggatgatgaccctgttaaccccaggcctggtact
cttcgccatgctgttatccaagataggcctctctggattgtgttcaagagggacatggtt
atcacgctgaagcaggagctcatcatgaacagcttcaagacaattgatggcagaggagcc
aatgtccacattgctaatggagggtgcatcacaatccagtatgttaccaatgtcatcatc
catggcctgcatgtccatgactgcaaacccactgggaatgctatggtaagaagctcccca
acacactttgggtggaggacaatggctgatggagatgccatctccatatttggctcaagt
cacatctgggtcgatcacaactccttgtcccattgtgctgatggtcttgtggatgctgtc
atgggctcaacagctattacaatttccaacaaccacctcacccaccacaatgaggtgatc
ctgctgggccacagtgactcttacactagagacaagcaaatgcaagtgaccatcgcctat
aaccactttggagagggactgatccagagaatgccacggtgtagacatggatatttccat
gtggtgaacaatgactacactcactgggagatgtatgctattggtggaagtggtaacccc
actatcaacagccagggcaaccgatacaatgctcctcttaacccttttgccaaggaggtg
actaagagggtggaaacagctcaaactgagtggaaaggttggaattggagatcagaggga
gacttgctgctgaatggtgcttacttcaccccatctggagctggagcatcagctagctat
gccagggcctctagcttaggagctaaatcttcttcaatggttggtactatgacttctaat
gctggtgcactcggttgccgcagaggccgctcctgctag
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