Lotus japonicus: 130722642
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Entry
130722642 CDS
T04348
Name
(RefSeq) protein transport protein SEC23 E-like
KO
K14006
protein transport protein SEC23
Organism
lja
Lotus japonicus
Pathway
lja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130722642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130722642
Membrane trafficking [BR:
lja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130722642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
TopoV_HHH
Vps36-NZF-N
EST1
Motif
Other DBs
NCBI-GeneID:
130722642
NCBI-ProteinID:
XP_057429430
LinkDB
All DBs
Position
6:22749284..22755985
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AA seq
767 aa
AA seq
DB search
MSEMASTDPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCK
TCTSALNPFARVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYTLPPP
HSDPSSSSSSSPVFLFLLDTCLIAEEIGFLKSALSQAIELLPDNALVGFISFGTQVQVHE
LGFSDISKVYVFRGSKDIPKDQILEQLGLASASASARRPQKVAPSSNSLVSRFLMPASDC
EYTLNALLDELQTDQWPVPPGRRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTE
GPGTIVSKDLSDPVRSHKDLDKDAAPFFKKAVKFYESLAKQLVSQGHVLDLFASALDQVG
VAEMKVVVERTGGLVVLAESFGHSVFKDSFKHVFEEGEQSLGLCFNGTFEINCSKEIKIQ
GIIGPCTSLEKKEPSVSDTVIGEGNTTAWKMCGLDKSTCLTVLFDLSSSDRSNTPGGANQ
QLYLQFLTSYQAPDGQLVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARYASLKME
TEETFDATRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNN
SPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFS
VVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPHDDAQMIIRERFPVPRLVVCDQHGSQA
RFLLAKLNPSATYNSAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggcgagcacggatcccgagggagtagacggagtacggatgacatggaac
gtgtggcccagcagcaaagtcgaagcaagcaagtgcgtgatcccattagcggccaccgtc
gccgtgatccgccctcaccccgacatccctcgcctcccgtactcccctctccgctgcaaa
acctgcacctccgccctcaaccccttcgcccgcgtcgacttcaccgccaagatctggatc
tgtccgttctgctatcaacgcaaccatttccctcctcactacaacgccatctccgagacc
aatctccccggtgaactctaccctcaatacaccaccgtcgaatacaccctccctcctcct
cactccgatccttcctcctcctcctcctcctccccggtgttcctcttcctcctcgacacc
tgcctcatcgccgaggagatcggttttctcaaatccgctctcagtcaggcaattgagctt
ttacccgacaatgccctcgtcggtttcatctcgtttgggactcaggttcaggttcatgaa
ttaggtttctctgatatctcaaaggtttatgtcttccgaggttctaaggacattcccaag
gatcagattttagagcagcttggtcttgcttctgcttctgcttctgctaggagaccgcag
aaagttgcaccttcctccaattcgctcgtctcgcgcttcttgatgcctgcgtcggattgt
gaatacactctcaatgcgctgctcgacgaattgcaaaccgatcagtggccggttccacct
ggccgccgccccgctcgctgtactggtgttgccttgagtgttgctgccggtttgcttagt
gcttgtaatcctgggacgggggctagaatcatagctttggttgggggaccctgcacagaa
ggacccggcacgattgtgtcaaaagacctgtcagaccctgtgcgctctcataaggatctc
gataaagacgcagcaccattctttaagaaagcagtcaaattctatgagagtctcgcgaaa
cagcttgttagccagggtcatgttttggatctttttgcatcagcacttgaccaggttgga
gttgcagaaatgaaagttgtggttgaaagaactggtggccttgttgtcctggctgaaagt
tttggtcattcagtcttcaaggactcttttaagcatgtttttgaggaaggggagcaatct
cttggactttgttttaatggaacatttgagataaattgttcaaaggaaatcaaaattcag
ggaataattggaccttgcacgtcgttggaaaagaaagagccttctgtttctgatactgtt
ataggagaggggaacacaactgcatggaagatgtgtggtcttgacaagagtacgtgcttg
actgtgttgtttgatctttcatcaagtgatcgttcaaacactccaggtggtgccaaccaa
caactgtacctgcagttccttacaagttaccaggcgccagatggtcaattagtgcttcgt
gtcacaacagtaaccagaagatgggtagacagttctgttagctctgaggaattggttcaa
ggatttgaccaagaaactgctgcagtggtaatggctagatatgcttctctgaagatggag
actgaggaaacatttgatgccacacggtggttggataggttcctcatccggctctgttcc
aagtttggtgactaccgcaaggatgatccatcatcttttacattaaacccgtcgttttcg
ctgttcccccagtttatgttcaatcttcgacgctcacagtttgtacaggtttttaacaac
agtccagatgagactgcatacttccgcatgttgttaaaccgggaaaatattagtaatgca
gccgtcatgattcagccatctctaatatcatattcatttaattcactgcctgcaccagca
ttgttagatgtggcttccattgccgcagaccggattctgttgctagattcatatttcagt
gtggttatttttcacgggatgacaatagctcagtggcgcaacttgggataccagaaccaa
ccagaacaccaggcatttgcccagctattacgagctccacatgatgatgcccaaatgata
atcagagaacggttccctgtccctagattggtagtttgtgatcaacatggttcccaggct
agatttttgttagcaaagctgaatccctcagcaacatataatagtgcacatgagatggct
gctggttcagatgtaatctttactgatgatgtgagccttcaagttttctttgagcatctg
caaaggctggctgtccaatcttga
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