Lotus japonicus: 130733218
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Entry
130733218 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130733218
KO
K12869
crooked neck
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130733218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130733218
03036 Chromosome and associated proteins [BR:
lja03036
]
130733218
Spliceosome [BR:
lja03041
]
Complex B
Other components
Prp19-related factors
130733218
Complex C
130733218
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130733218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
HAT_Syf1_M
TPR_8
TPR_17
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
130733218
NCBI-ProteinID:
XP_057441322
LinkDB
All DBs
Position
1:5688514..5692926
Genome browser
AA seq
695 aa
AA seq
DB search
MSSSREGDPNLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
LKITDPHELGEYRLRKRKEFEDLIRRVRWNTSVWLKYAQWEVSQNDFKRARSVWERALEV
DYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNVAGARQ
VFERWMKWMPDQQGWLSYIKFELRYGEIDRARGIFERFVLCHPRVGAWIRYAKFEMKGGE
VAKARQVYERAVERLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAEDL
YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERVR
DVYERAIANVPPAEEKLYWQRYIYLWINYALYEELDAGDVERTREVYKECLNLIPHKKFS
FAKMWLLAAQFEIRQLNLKGARLILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEK
YLEWAPENCYAWSKYAELERSLSETDRARSIFELAIAQPALDMPELLWKAYIDFETAEGE
FERARALYVRLLDRTKHLKVWISYAEFEATAVDEGLDLPEEEQKKQCIQRARRVFEEALN
YFRSSVPDLKEERAMLLEKWLNMEASSGELGDVSLVQSKLPKKLKKRRHVPTEDGSTRIE
EFIDYLFPEETQTTNLKILEAAYKWKKQKLSNDDD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcgagagaaggagacccgaatctgggttacctgacccgaaaagacacggag
gtcaaactccctcgcccgacccgagtcaagaacaaaacccccgctccgatccaaatcacc
gccgagcagatcctccgtgaagccagggagcggcaagaagcagaaatccgcccgccgaag
ctcaaaatcaccgacccccacgagctcggcgagtatcgcctccgcaagcgtaaggagttc
gaggacctcatccgccgtgtccgatggaacaccagcgtctggctcaagtacgcacagtgg
gaagtctcccaaaacgacttcaaacgcgcgcgttccgtctgggaacgcgcgctcgaagtc
gattacaagaatcatacgctctggttgaagtatgcagaagtggagatgaagaacaagttc
atcaaccatgctaggaacgtttgggatcgtgccgttacgcttttgccgcgaatcgaccag
ctctggtataagtacattcacatggaggagatgctggggaatgtggctggggcgaggcag
gtttttgagaggtggatgaagtggatgccggaccagcaagggtggttgtcgtatattaag
tttgagcttcgatacggggagattgatcgcgcgagggggattttcgagcggttcgtgttg
tgtcatccgagggttggggcttggattaggtatgctaagtttgagatgaagggtggggag
gttgcgaaggcgaggcaggtttatgagagggcggtggagaggctcgcggatgatgaggag
gcggagcagttattcgtggcgtttgcggagtttgaggagaggtgtaaggagagtgagagg
gctaggtgtatatataagtttgcgcttgatcatattccgaaggggagggctgaggatttg
tataggaagtttgtcgcgtttgagaagcagtatggggatagggaagggattgaggatgct
attgttgggaagagaaggtttcagtatgaggatgaagtgaggaaaaaccctttgaattat
gattcctggtttgattatattaggttggaggagagtgtggggaataaggaaagagttagg
gatgtttatgagagagctattgccaatgttcctcctgctgaggagaagctgtattggcag
cgatatatctatttgtggattaattatgcactctatgaagagcttgatgctggagatgtg
gagcgaacaagagaagtatacaaggagtgtcttaacttgatacctcacaaaaaattctca
tttgctaagatgtggcttctagcagcccaatttgaaatacgtcagctgaatctcaagggt
gctcgtctaatattaggaaatgctattggaaaggctcctaaagataagatttttaagaag
tatatagagatagaactgcagcttggtaacattgatcgatgcagaaaattgtatgaaaaa
tatttggagtgggcgcctgaaaattgctatgcttggagcaagtatgcagaattggagaga
tctttgtctgagactgatcgagctagatcaatatttgagcttgcaattgcccagccagca
ttggacatgcctgagctgttgtggaaggcatacattgactttgagactgctgagggtgaa
tttgagagagcaagagcactttatgtaaggcttcttgatcgaacaaagcacttgaaggtc
tggataagctatgcagaatttgaggcaacagctgtcgatgagggtttagacttaccagaa
gaagaacaaaagaagcaatgcattcagcgtgctagaagggtgtttgaagaagctcttaac
tacttcagatcgtcggttccggatttgaaagaagaaagggcaatgctattggaaaaatgg
cttaacatggaggcttcatctggtgagctgggtgatgttagcttagtccagtctaagctg
cccaagaagctgaagaagagaaggcatgttcccactgaagatggttctactagaattgaa
gaattcatcgactatttattccctgaggaaactcagacaaccaatctcaagatcttggaa
gctgcttacaaatggaagaagcaaaaattgtctaacgatgatgattag
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