Lotus japonicus: 130738975
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Entry
130738975 CDS
T04348
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130738975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130738975
03012 Translation factors [BR:
lja03012
]
130738975
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130738975
Translation factors [BR:
lja03012
]
Eukaryotic type
Release factors
130738975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_3
eRF1_1
eRF1_2
Ribosomal_L7Ae
Phage_head_chap
Motif
Other DBs
NCBI-GeneID:
130738975
NCBI-ProteinID:
XP_057447147
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Position
2:complement(67277238..67279624)
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AA seq
428 aa
AA seq
DB search
MADAHETESVKVWKTKKLIKALEAARGNGTSMISLILPPGDQIARVTKLLGVEFGTASNI
ENKVNRQSVLGAITSAKQRLKLYNKVPDNGLVLYTSTIMTEDGKENKVAFNFEPFKPINA
FLYRCDNRFHTEALSELLCETDDMYGFVVMGHNRTLFGTLGGNTRKVLHEFRMDFSMSVV
RHPDNTEKRLFYVNKAAELATHFYINPTTGQPNVSGLILAASADYITDLSQSDVFDPRLK
AKILNVVQIHDGWVLGFNQAIELSAEIMSHVKYIQEKKLIGKYFEEIGQDTGKYAIGVDE
TLKALEMGAIATLIVWENLDIYRYVLKNDVTGEIVIKHYNNKDYVSYVAGYEVQEKMLLV
DWLSEEYQRYGCVLEFVTEKSQEGEQFCRSLDGIGGILQYKLEFGSSRYQSHPASTAEMH
EIFVNLFD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctcatgagactgagagtgttaaggtatggaaaacaaagaaattgattaag
gctcttgaggctgcaagaggaaatggtacgagtatgatttccctgatcttgcccccaggt
gatcaaatagctcgtgttactaaactgcttggcgttgagtttggaactgcttcaaacatc
gaaaacaaggtgaatcggcaatctgtgttgggtgcaatcacttctgctaagcagaggctt
aagctttataacaaggttcctgataatggacttgtgttgtataccagcacaattatgact
gaagatgggaaggaaaataaggtggcctttaattttgagccattcaaacctatcaacgcg
tttctctatcgttgtgacaacaggtttcacacagaagctctaagtgagcttctttgtgaa
actgatgacatgtatggatttgttgtcatgggtcacaacagaactctgtttgggactttg
ggtggtaatacaagaaaagtgcttcatgagtttcgcatggatttctcaatgtcagtagta
cgacacccagataacacggagaagcgccttttctatgtgaacaaggctgcagagcttgca
acccacttttacatcaaccctactaccggccaaccaaatgtttcaggattaatactcgct
gcttcggctgattacataactgaccttagtcagtcagatgtgtttgatcctcgacttaag
gcgaaaatacttaatgttgttcaaatacatgatggatgggttttggggtttaaccaggct
attgaattatctgctgaaattatgtcccatgtaaagtatattcaggagaaaaagttgatt
ggaaaatattttgaggaaatcggccaggatactggaaagtatgccattggtgttgatgaa
actctaaaagctctggagatgggagctattgcgacacttattgtgtgggaaaatctggat
atatataggtatgtcttaaaaaatgatgttactggtgagattgtcataaagcactacaac
aacaaggattatgtgagctatgttgctggttatgaggttcaggaaaagatgcttcttgta
gattggttatcagaagaataccaacggtatggctgcgttcttgagtttgtcactgaaaaa
tcacaagaaggtgaacaattttgcagaagtttggatgggattgggggtatcttgcagtac
aaactcgagtttggatcctctcgttaccaatcccatccggcctccaccgcggagatgcat
gagatattcgttaatttatttgattaa
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