Lotus japonicus: 130740770
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Entry
130740770 CDS
T04348
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130740770
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130740770
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
130740770
NCBI-ProteinID:
XP_057449442
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Position
2:complement(89241676..89244023)
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AA seq
391 aa
AA seq
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MVSQGTNSIIWRFFLPIVIASLFTPNFIYAKQSKIIGLKMNVIDRCWRPNPEWRRQRYQL
ATCSVGYAGKMTNNIGDDLIHYKVIDPTDDPINPRPGTLRYGASVIQGKVWIKFQRDMKI
RLEKPLLISSFTTIDGRGVNVNIADNACLMIYKATNIIIHGIRIHHCKAQAPGMVMGPNG
KVITLGQVDGDAIRLVTASKIWIDHNTLYDCEDGLLDVTRGSTNVTVSNNWFRDQDKVML
LGHDDGYVRDQDMKVTVVYNHFGPNCNQRMPRIRYGYAHVANNFYQGWLQYAIGGSTEPS
LKSEANLFIAPIAGNKEVTWRKSTHTNMNKWEFHSVRDVFENGASFTETKGGHVRKPNYS
IEQSFEVSDAKSVRSLTMWSGALRCSKTSIC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcagggtaccaattctatcatttggcgctttttcttgcctattgtgattgcc
tcccttttcactccaaactttatttatgccaagcaatccaaaataattggcttgaagatg
aatgtgattgatcgatgttggagacctaatcctgaatggaggaggcaacgatatcaacta
gctacttgctctgtgggctatgctggcaagatgacaaataacattggtgatgatctcatc
cattataaagttattgaccctactgatgaccctataaacccaaggcctggcacgttgagg
tatggagcttcggtgattcaaggtaaagtgtggatcaaatttcaaagagacatgaaaatt
aggctcgagaaacctcttctcattagtagtttcaccaccatagatggtcgaggcgtaaac
gtcaacattgctgataatgcgtgcttgatgatatataaggccaccaacataatcatacat
ggcattcgaattcatcattgcaaagctcaagctccagggatggtgatggggcctaatgga
aaagttattactttggggcaagtagatggggatgcaataagattggttacggcttcaaaa
atttggattgatcataacacactttatgattgcgaagatggccttcttgatgtcacacga
ggttctactaatgtgacggtgtccaacaactggttcagagatcaagacaaggttatgctt
cttggacatgatgatggctatgtgagagatcaggacatgaaggtcacagttgtgtacaat
cattttggacctaattgcaaccagcgcatgccacggatccgctatggatatgcacatgta
gccaataatttttaccaaggatggttgcaatatgcaattggtggaagcacagaacccagt
ctcaaaagcgaagctaacctcttcatagcaccgattgcggggaataaagaggtaacatgg
agaaagagtactcatacaaatatgaataagtgggaatttcattcagtgcgagatgttttt
gaaaatggagcatccttcacggaaacaaaaggaggacatgtgcgtaagccaaattatagc
atagaacagagttttgaagtttctgatgccaaatctgtgagatcattgacaatgtggtca
ggtgcactacgatgcagcaaaacctctatatgttga
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