KEGG   Lotus japonicus: 130747189
Entry
130747189         CDS       T04348                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130747189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    130747189
Spliceosome [BR:lja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130747189
 Complex B
    130747189
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Abdominal-A zf-CCCH_4 zf-CCCH_DUS3L Torus
Other DBs
NCBI-GeneID: 130747189
NCBI-ProteinID: XP_057456023
LinkDB
Position
3:complement(89837372..89840777)
AA seq 351 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDIVTP
GVDAQGQPIDPRKIQTHFDDFYQDLFDELSKYGRLQTLNVCDNLADHMVGNVYAQFREEE
HAAEALKNLTGRFYAGNPIIVDFSPVTDFREATCRQYEEDSCNRGGYCNFMHLKKISREL
RRELFGMDNRGRHGRSRSPDRHRSNEDRSPRGHSRKYDERSHHHESRGRRRRSNSPGHRR
GRSRSPRGSRERRPARDGSEERRARIEQWNREREEQKHESKVSTEENNAGNNGHVQDSNE
QWNREREEQKHESKVSTEENNDGNNGHVQDGNEHHDYQQQQQQPLEGGYDY
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcgatcttcggcaccgagaaagacagagtcaactgccctttc
tacttcaagatcggcgcctgccgccacggcgaccgctgctcgcgcctccacacaaaacca
agcatcagcccaacgctgctactctccaacatgtaccagcgtccggacatcgtcaccccc
ggcgtcgacgcccagggtcagcccatcgacccccgcaagatccaaacccacttcgatgac
ttctaccaagacctcttcgatgaactctccaagtacggtcgacttcaaacgctcaacgtt
tgtgataatctcgctgatcacatggttggtaatgtttatgctcagttcagggaggaagaa
cacgctgctgaggcgcttaagaatctcactggaagattttatgctggaaacccgattatt
gtggacttttctcctgtaacagacttccgtgaggctacttgcaggcagtatgaggaggat
tcttgtaaccggggaggctattgcaactttatgcacttgaaaaaaattagcagggaattg
aggcgtgagttgtttgggatggacaaccgtggcaggcatggccgaagcaggagtcctgac
aggcatcgaagcaacgaggaccgctctcctcgtggtcatagcagaaaatatgatgaaagg
agtcatcaccatgaaagtcgtggcaggagacgcaggagcaacagccctggccatcggaga
ggaagaagtcgaagtcctcgtggaagtagggagcgcagaccagccagggatggcagtgaa
gagagacgtgccagaattgagcaatggaacagggagagggaagagcaaaaacatgaaagt
aaagttagtactgaggaaaacaatgctggtaacaatgggcatgtgcaagatagtaatgag
caatggaacagggaaagggaagagcaaaaacatgaaagtaaagttagtactgaggaaaac
aatgatggtaacaatgggcatgtgcaagatggtaacgagcatcatgattatcagcagcaa
cagcaacaacctctggaaggaggatatgattactga

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