Lotus japonicus: Lj0g3v0060279.2
Help
Entry
Lj0g3v0060279.2 CDS
T04348
Symbol
Lj0g3v0060279.2
Name
(Kazusa) -
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Lj0g3v0060279.2 (Lj0g3v0060279.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
Lj0g3v0060279.2 (Lj0g3v0060279.2)
Spliceosome [BR:
lja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Lj0g3v0060279.2 (Lj0g3v0060279.2)
Complex C
U4/U6.U5 tri-SnRNP related factors
Lj0g3v0060279.2 (Lj0g3v0060279.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
LinkDB
All DBs
AA seq
223 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL
EPLYNDYRKLRRKSPDGQFSLTHVDEVIDELLTKDYSCDIAMPRIKRRWTIEALGTLEPR
RSALEEDFEEEEEKEDNDQPVDEVEDRAYEKDYYRGRSPARER
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgaaccgatccagcggcgaagagcataagaggaacaaaccctcaaaaccta
gtcgagaagattctccgttccaagatctaccagcacacctattggaaggaacaatgcttc
ggcttaaccgccgagaccttggttgacaaggccatggagcttgaccatctcggcggcacc
tacggcggcaaccggaaacccactcccttcatgtgcctcgtcatgaagatgctccagatt
caacctgagaaggaaatcgttatcgagttcatcaaaaacgaggattacaagtatgtgagg
attcttggtgctttttatctgcgtcttactggttctgatattgatgtgtaccgttacctg
gaacccttgtataatgattatcggaaactgcggcgaaaatcaccggatggacagttttcg
ttgacgcacgtggatgaggtcattgatgagcttctcacgaaagattattcgtgtgatatt
gctatgccgcgtatcaagagaaggtggactattgaagctcttggtactttagaacctagg
agaagtgcacttgaagaagatttcgaggaggaagaggagaaagaggataatgaccagcct
gttgatgaggttgaagatagggcgtatgagaaggattattatcgtgggcgaagccctgca
agggaaaga
DBGET
integrated database retrieval system