KEGG   Lotus japonicus: Lj0g3v0060279.2
Entry
Lj0g3v0060279.2   CDS       T04348                                 
Symbol
Lj0g3v0060279.2
Name
(Kazusa) -
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Lj0g3v0060279.2 (Lj0g3v0060279.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    Lj0g3v0060279.2 (Lj0g3v0060279.2)
Spliceosome [BR:lja03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    Lj0g3v0060279.2 (Lj0g3v0060279.2)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    Lj0g3v0060279.2 (Lj0g3v0060279.2)
SSDB
Motif
Pfam: PRP38
LinkDB
AA seq 223 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL
EPLYNDYRKLRRKSPDGQFSLTHVDEVIDELLTKDYSCDIAMPRIKRRWTIEALGTLEPR
RSALEEDFEEEEEKEDNDQPVDEVEDRAYEKDYYRGRSPARER
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcgaatcgaaccgatccagcggcgaagagcataagaggaacaaaccctcaaaaccta
gtcgagaagattctccgttccaagatctaccagcacacctattggaaggaacaatgcttc
ggcttaaccgccgagaccttggttgacaaggccatggagcttgaccatctcggcggcacc
tacggcggcaaccggaaacccactcccttcatgtgcctcgtcatgaagatgctccagatt
caacctgagaaggaaatcgttatcgagttcatcaaaaacgaggattacaagtatgtgagg
attcttggtgctttttatctgcgtcttactggttctgatattgatgtgtaccgttacctg
gaacccttgtataatgattatcggaaactgcggcgaaaatcaccggatggacagttttcg
ttgacgcacgtggatgaggtcattgatgagcttctcacgaaagattattcgtgtgatatt
gctatgccgcgtatcaagagaaggtggactattgaagctcttggtactttagaacctagg
agaagtgcacttgaagaagatttcgaggaggaagaggagaaagaggataatgaccagcct
gttgatgaggttgaagatagggcgtatgagaaggattattatcgtgggcgaagccctgca
agggaaaga

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