Lotus japonicus: Lj2g3v1106410.1
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Entry
Lj2g3v1106410.1 CDS
T04348
Symbol
Lj2g3v1106410.1
Name
(Kazusa) -
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Lj2g3v1106410.1 (Lj2g3v1106410.1)
09124 Replication and repair
03420 Nucleotide excision repair
Lj2g3v1106410.1 (Lj2g3v1106410.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj2g3v1106410.1 (Lj2g3v1106410.1)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj2g3v1106410.1 (Lj2g3v1106410.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Lj2g3v1106410.1 (Lj2g3v1106410.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Lj2g3v1106410.1 (Lj2g3v1106410.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
NAD_binding_9
Motif
LinkDB
All DBs
AA seq
186 aa
AA seq
DB search
MVISSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGVDVAAIE
AKIAKYQEENSEQIMVNRARKAEELAAALAASKGQAAQTANDVGASQDFGAVPQGQYAPT
FAGQPRPTGMAPQPLPLGGSDMPGYAGDDDETMRLRAERGARAGGWSLEISRKRALEEAF
GSMWVC
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggtaatctccagtaccaatccccacaataaggagatagccatcaggaggaggattgct
agcatatttaataaacgtgaagatgatttcccatctttgagagaatacaatgattacttg
gaggaagtagaggacatgacgtttaacttgattgaaggagttgatgtcgctgctattgaa
gcaaagattgctaaataccaggaagaaaattcagaacaaataatggttaatcgagcccgt
aaggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgct
aatgatgtgggtgcaagccaagactttggtgctgttcctcagggacaatatgcacctaca
tttgcaggacagcctagaccaaccggcatggctccacagcctttaccactcggagggagt
gacatgccgggctatgcaggtgatgacgatgaaacgatgaggctacgagcggagagagga
gcaagggctggaggatggagtctagaaataagcaggaagagggcacttgaagaagctttt
ggaagcatgtgggtttgttga
DBGET
integrated database retrieval system