KEGG   Lotus japonicus: Lj2g3v1106410.1
Entry
Lj2g3v1106410.1   CDS       T04348                                 
Symbol
Lj2g3v1106410.1
Name
(Kazusa) -
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
lja  Lotus japonicus
Pathway
lja03022  Basal transcription factors
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Lj2g3v1106410.1 (Lj2g3v1106410.1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lj2g3v1106410.1 (Lj2g3v1106410.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj2g3v1106410.1 (Lj2g3v1106410.1)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj2g3v1106410.1 (Lj2g3v1106410.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Lj2g3v1106410.1 (Lj2g3v1106410.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Lj2g3v1106410.1 (Lj2g3v1106410.1)
SSDB
Motif
Pfam: MAT1 NAD_binding_9
LinkDB
AA seq 186 aa
MVISSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGVDVAAIE
AKIAKYQEENSEQIMVNRARKAEELAAALAASKGQAAQTANDVGASQDFGAVPQGQYAPT
FAGQPRPTGMAPQPLPLGGSDMPGYAGDDDETMRLRAERGARAGGWSLEISRKRALEEAF
GSMWVC
NT seq 561 nt   +upstreamnt  +downstreamnt
atggtaatctccagtaccaatccccacaataaggagatagccatcaggaggaggattgct
agcatatttaataaacgtgaagatgatttcccatctttgagagaatacaatgattacttg
gaggaagtagaggacatgacgtttaacttgattgaaggagttgatgtcgctgctattgaa
gcaaagattgctaaataccaggaagaaaattcagaacaaataatggttaatcgagcccgt
aaggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgct
aatgatgtgggtgcaagccaagactttggtgctgttcctcagggacaatatgcacctaca
tttgcaggacagcctagaccaaccggcatggctccacagcctttaccactcggagggagt
gacatgccgggctatgcaggtgatgacgatgaaacgatgaggctacgagcggagagagga
gcaagggctggaggatggagtctagaaataagcaggaagagggcacttgaagaagctttt
ggaagcatgtgggtttgttga

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