Lactobacillus johnsonii DPC 6026: LJP_1200c
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Entry
LJP_1200c CDS
T01960
Name
(GenBank) putative thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh00730
Thiamine metabolism
ljh01100
Metabolic pathways
ljh01240
Biosynthesis of cofactors
ljh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LJP_1200c
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LJP_1200c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljh03016
]
LJP_1200c
Enzymes [BR:
ljh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LJP_1200c
Transfer RNA biogenesis [BR:
ljh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LJP_1200c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AEB93522
LinkDB
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Position
complement(1296746..1297963)
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AA seq
405 aa
AA seq
DB search
MQYTEVMVRYGELSTKGKNRKDFIGRLAGNVTRALQDFPEIEIHPKHDRMHIVLNGAPFE
KIDQRLKLVFGIQTYSPTIKVDKNLDAIKKVSLELMQATFKNGMTFKVNTRRSDHDFEYD
TNQLNMMIGDYLFDNMDNLKVQMKKPDLVLRIEVRQDAIYISNQLLHGAGGMPVGTAGKA
VMMLSGGIDSPVASYLAMKRGVEIDMVHFFSPPYTTEKALAKAKELTGILANYSGKINFI
AVPFTEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAMRGGLAIFNGESVGQVASQTLES
MVAINDVTSTPVLRPVATMDKTEIIKLAEQIGTFDLSIEPFEDCCTIFAPPRPKTKPKLD
EARKLEDRLDAEGMIQRAIDGMEITPIYPNQKFLDDKAQEDADLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatacagaagtaatggttcgctatggtgaactatccactaagggaaaaaatcga
aaagattttattgggagacttgctggtaatgtaactagagctttgcaagattttccagaa
atcgaaatccatcctaaacatgatcgtatgcatattgtcttaaatggtgcaccatttgag
aaaattgatcaacgtttaaaacttgtttttggtattcaaacatattctccaactataaaa
gttgataagaatcttgatgcaattaaaaaagtatcccttgaattgatgcaagcaactttt
aaaaatggtatgacatttaaagttaatactagacgtagtgaccatgattttgaatatgac
actaatcagttaaacatgatgattggtgattacctatttgataatatggataatttaaag
gttcaaatgaaaaagcctgacctagtcttaagaattgaagttcgtcaagacgcaatctat
atttcaaaccaacttcttcatggagcaggtggtatgccggttggaactgctggaaaggca
gtcatgatgctatcaggtgggattgattctccagtagcttcttacttagcaatgaagcgt
ggagttgaaattgatatggtacacttctttagtcctccatatactactgaaaaggcactt
gctaaagcaaaagagttaactggaattttggctaactattctggaaagattaactttatt
gctgtaccttttactgaaattcaagagcaaattaaggaaaagttaccagaaggttactta
atgaccattcaacgccgctttatgttgcaattagcagatcgtattcgtgcaatgcggggt
gggttagcaatcttcaacggtgaatcagttggtcaagtggcatctcaaacactagaatca
atggttgcaattaatgatgtgacttcaacgccggttcttcgtccagtggctacaatggat
aaaactgaaattattaagctagctgagcaaatcggaacattcgacctttctattgaacca
tttgaagactgctgtacaatttttgctccgccgcgtccaaagactaaaccaaaattggat
gaagctcgtaagctagaagatagacttgatgctgaaggaatgattcagcgagcaattgat
ggaatggagattacaccaatttatccaaatcaaaagttcttggatgataaggctcaagaa
gacgcagacttgttataa
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