Lactobacillus johnsonii DPC 6026: LJP_1792c
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Entry
LJP_1792c CDS
T01960
Name
(GenBank) putative tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljh03016
]
LJP_1792c
Transfer RNA biogenesis [BR:
ljh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LJP_1792c
Prokaryotic type
Methyltransferases
LJP_1792c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
Ras
Roc
AAA_22
Csa3_N
ABC_tran
SRPRB
AAA_16
Maf1
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
AEB94108
LinkDB
All DBs
Position
complement(1962926..1964311)
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AA seq
461 aa
AA seq
DB search
MAQVLTQFDTIAAISTPIGEGGISIVRLSGEDAVAIANKLFKGADLTQVPSHTIHYGHIV
DPKTKDVVDETMVSVLRAPKTFTREDMVEINCHGGMIVTNDILQLLLANGARMADPGEFT
KRAFMNGRIDLTQAESVMDIVRAKTDKSRQVAMTQLAGGLLDKIRTMRQELLDTMAHEEV
NIDYPEYDMDDLTSQEMKKKAEEVSKQIDQLLKTAQEGKIIRNGLATAIVGRPNVGKSSL
LNYLTQDDKAIVTDIAGTTRDTLEEYVSVKGVPLKLIDTAGIHHTENKVEKIGVERSKKA
IAEADLVLLLLDASQDLTDEDKNLLNLTANKKRIIILNKQDLGTKISQEMIREITDNPII
VTSILKQENMAALENAIEQLFFSGIENSQNQILVTNQRQAGLLAKAKQSLEDVVNGIDDA
MPLDLVQIDLKNAWDTLGEITGESAPDELITQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtattaacacaatttgatacaatcgctgcaatttctactcctattggcgaa
ggaggtatatcaattgttcgtctatctggtgaagatgcagtagcgattgctaataaactt
tttaaaggagcagatttaactcaggttccctcacatacaattcattatggacatatcgtt
gatcctaaaactaaggatgttgtagacgagacaatggttagtgtattacgcgcaccaaaa
actttcactcgagaagatatggttgaaatcaattgtcatggtggaatgattgtaactaat
gatattttgcagctacttttggcaaacggtgctcgaatggctgatccgggtgaatttact
aagcgcgcctttatgaatggtcgtattgacttgacacaagctgaatctgtaatggatatt
gttcgggctaagacggataagtctcgtcaagttgctatgacacaattagctggtggattg
ttagataaaatcagaacaatgcgtcaagaacttttagatacaatggctcatgaagaagtg
aatattgattatccagaatatgatatggacgatttaacttctcaagaaatgaagaagaag
gccgaagaagtttcaaagcaaattgatcaattgctaaaaacagctcaggaagggaaaatt
atccgtaatggtctagcaacggctatcgtgggaagaccaaatgttggtaaatcctctctt
ttaaattatttaacgcaggacgataaggcaattgttactgatattgcgggaacaacaaga
gatacacttgaagaatatgtttctgttaaaggcgtaccgctgaagctgattgatactgct
gggattcaccatacagaaaacaaggtcgaaaaaattggagttgaacgttcaaagaaagct
atcgctgaagctgatttggtgcttttacttctggatgcaagtcaagatttaacagacgaa
gataaaaatttattaaatttaactgctaataaaaaacgaattatcattttaaacaaacaa
gatctaggcacaaaaatttcccaggaaatgataagagaaattactgataatccaattatt
gtaacttcaatcttaaagcaagaaaatatggctgcgcttgagaatgcaattgagcaatta
ttctttagcggaatagaaaattcacaaaatcaaatcttggtaacaaatcaaagacaagct
ggtttattagccaaagcaaagcaatctttagaagacgttgtcaatggaattgatgatgca
atgcctttagatttggttcaaattgatctcaaaaatgcttgggatactttgggtgaaatt
actggtgaaagtgcacctgatgaattaattacccaattatttagtcaattctgtcttgga
aagtag
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