Lactobacillus johnsonii N6.2: T285_01695
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Entry
T285_01695 CDS
T02941
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T285_01695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljn03021
]
T285_01695
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_01695
Enzymes [BR:
ljn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T285_01695
Transcription machinery [BR:
ljn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T285_01695
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T285_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
DUF961
Corazonin
Motif
Other DBs
NCBI-ProteinID:
AHA96818
UniProt:
A0A7D9N521
LinkDB
All DBs
Position
359680..360618
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVDQEEAYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTALSYIQIDGVL
HEFSTIPGVREDVTKIILNLKKLELKSLSDEEKIAEIDVTGPAIVTAADLKVDSDIEVLN
PDQYICSIADGGHLHMNVAIKTGRGYVPASENKTDDMPIGVIPVDSLFSPIKKVNYQVES
ARVGKRDDYDKLTLEIWTDGSITPNDALSFAAKILVEHFKVFMSTDMDAQFDDVMVEKED
DKNEKKLEMTIEELDLSVRSYNCLKRAGINTVQELTDKSEADMMRVRNLGRKSLEEVKNK
LADLGLSLRQDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgtagtagaccaagaggaggcatacggtaag
tttgttgtcgaaccactggaacgcggtttcgggactactttaggtaactcactccgtcga
gttttacttacttctattccaggtacggcactttcttacattcagattgatggtgtgtta
catgaattttcaacaattcctggcgttagagaagacgtcacgaagatcattcttaatttg
aagaaactagagttaaagtcactctcagatgaagaaaaaattgctgaaatcgatgtaact
ggaccagcaattgtaactgctgctgatttgaaggtcgactctgatattgaggtcttaaat
ccagatcaatatatttgtagtattgctgatggtggccatttgcatatgaacgttgcgatc
aagactggtcgtggttatgttcccgcaagtgaaaacaagacagatgacatgcctattggt
gtcatccccgttgattcactcttctcaccaatcaaaaaagttaactaccaagttgaaagt
gctcgtgttggtaagagagatgactatgacaaattaactttagaaatttggactgatggt
tcaatcacacctaatgatgcccttagtttcgctgcgaagattcttgtagaacacttcaaa
gtatttatgtctactgatatggatgcgcagtttgatgatgtaatggtagaaaaagaggac
gataagaacgaaaagaagcttgagatgacgatcgaagagcttgatttatctgttcgttcc
tataactgcttgaaacgtgcaggaattaatactgttcaagaattaactgataaatctgaa
gcagatatgatgcgcgtacgtaacttaggacgtaagtcattagaagaagtaaagaataaa
cttgccgatcttggtctatcacttcgtcaagatgactaa
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