KEGG   Liolophura japonica (common chiton): 135469807
Entry
135469807         CDS       T09976                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp04512  ECM-receptor interaction
ljp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135469807
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135469807
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ljp00535]
    135469807
Proteoglycans [BR:ljp00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   135469807
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 135469807
NCBI-ProteinID: XP_064604482
LinkDB
Position
7:complement(3126562..3230444)
AA seq 472 aa
MGRMKGIWTRQRLSVIGLSLYFTSVYCQNIIPLGAPSICPELRPGEDDLPGFDFISNYDL
DNALRRLGVRKVKGSNKLQVAYKITPRARLRIPTRSMFPTGIPDQFSFVTTFRMKGKANR
EKWNLIQIRDLEGNPQWGIRLDGQKKEVDFHIINFDGTLQRLTFTKAKKIFDKQWHKIHF
SVGRDRVEFYIDCVPVESQPLLPWRQVDVNGDIYLGTKDPGGQTVPFELQWMVMHCDPSK
PERETCEELPKTPPKPKPRDGLLESGYGEQKEGRCEVTCPRGPPGLNGTQGPPGFKGERG
EMGIPGVRGFPGPEGRAGPRGLPGRDGRPGEDGLPGAIGDKGEPGVRGPQGSPGRDGAKG
EVGERGLPGFPGDRGPAGEKGESGEPGIPGRNGLRGPRGDPGVPGTAAAGIKGEPGETGP
PGPQGLEGVPGIQGPRGQSGPAGPKGERGEDGDDGKRGPRGFRISCDLENGS
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggcaggatgaagggcatatggactcgccagagactctctgtcattggattgtcactg
tacttcacttctgtatactgccaaaacataattccactgggcgccccgtcgatatgtcca
gaactgaggcctggggaggacgatttacccgggttcgattttatatccaattatgactta
gacaatgctttaagacgactaggtgtacgaaaagtaaaaggatcaaataaactccaagta
gcatataaaattacacctcgagcgagattacgtataccaacacggagtatgtttccaaca
gggattccagatcagttttcatttgtaacaacatttagaatgaaaggaaaagctaataga
gaaaaatggaatttaatacaaattcgagatttagaaggcaacccacaatggggaatacga
cttgatggccaaaaaaaggaggtggactttcatatcattaattttgatgggacattacaa
cgactcacatttacaaaggctaaaaagatatttgacaaacagtggcacaaaatacacttt
agcgtaggccgtgatagggtagaattttacatagactgtgtaccggtggagtcacagcca
ttgttaccatggcgacaagtggacgttaacggcgatatatatcttggtacaaaagacccc
ggtggacagaccgtgccgtttgaacttcagtggatggttatgcattgtgacccgtccaaa
ccagagagagagacttgtgaggaactgccaaagacacctccaaaaccaaagccacgagac
gggctcctggagtcgggatatggagaacagaaagaaggtcgatgcgaagtgacgtgtccc
cgcggtccacctgggctaaatggcactcagggtccaccaggcttcaagggtgaacgaggc
gagatgggaatcccaggggttcgtggcttccccgggccagagggtagagcgggcccgcga
ggcctacctggtcgagatggtcgtcctggagaagacggcttacctggtgccattggggac
aaaggtgaacctggcgttcgtggaccacagggcagccccggtcgtgatggggccaaaggg
gaggtgggtgagagaggtttacctggattccccggggatagaggtccggcaggtgaaaag
ggtgagagtggggaaccaggtattccaggtaggaatggattgcggggcccacggggtgac
ccaggagttccaggtactgccgcagctggaatcaaaggcgaaccaggtgaaaccggccct
cctgggccccaaggattagagggtgtccctggcatacaagggcccagagggcaatcgggc
ccagcggggcctaagggtgaaagaggggaagatggtgatgacggaaagcgaggccctcga
ggttttaggatatcgtgtgacctggagaatggaagctaa

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