Liolophura japonica (common chiton): 135469807
Help
Entry
135469807 CDS
T09976
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp04512
ECM-receptor interaction
ljp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135469807
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135469807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ljp00535
]
135469807
Proteoglycans [BR:
ljp00535
]
Extracellular matrix (ECM) proteoglycans
Others
135469807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
135469807
NCBI-ProteinID:
XP_064604482
LinkDB
All DBs
Position
7:complement(3126562..3230444)
Genome browser
AA seq
472 aa
AA seq
DB search
MGRMKGIWTRQRLSVIGLSLYFTSVYCQNIIPLGAPSICPELRPGEDDLPGFDFISNYDL
DNALRRLGVRKVKGSNKLQVAYKITPRARLRIPTRSMFPTGIPDQFSFVTTFRMKGKANR
EKWNLIQIRDLEGNPQWGIRLDGQKKEVDFHIINFDGTLQRLTFTKAKKIFDKQWHKIHF
SVGRDRVEFYIDCVPVESQPLLPWRQVDVNGDIYLGTKDPGGQTVPFELQWMVMHCDPSK
PERETCEELPKTPPKPKPRDGLLESGYGEQKEGRCEVTCPRGPPGLNGTQGPPGFKGERG
EMGIPGVRGFPGPEGRAGPRGLPGRDGRPGEDGLPGAIGDKGEPGVRGPQGSPGRDGAKG
EVGERGLPGFPGDRGPAGEKGESGEPGIPGRNGLRGPRGDPGVPGTAAAGIKGEPGETGP
PGPQGLEGVPGIQGPRGQSGPAGPKGERGEDGDDGKRGPRGFRISCDLENGS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggatgaagggcatatggactcgccagagactctctgtcattggattgtcactg
tacttcacttctgtatactgccaaaacataattccactgggcgccccgtcgatatgtcca
gaactgaggcctggggaggacgatttacccgggttcgattttatatccaattatgactta
gacaatgctttaagacgactaggtgtacgaaaagtaaaaggatcaaataaactccaagta
gcatataaaattacacctcgagcgagattacgtataccaacacggagtatgtttccaaca
gggattccagatcagttttcatttgtaacaacatttagaatgaaaggaaaagctaataga
gaaaaatggaatttaatacaaattcgagatttagaaggcaacccacaatggggaatacga
cttgatggccaaaaaaaggaggtggactttcatatcattaattttgatgggacattacaa
cgactcacatttacaaaggctaaaaagatatttgacaaacagtggcacaaaatacacttt
agcgtaggccgtgatagggtagaattttacatagactgtgtaccggtggagtcacagcca
ttgttaccatggcgacaagtggacgttaacggcgatatatatcttggtacaaaagacccc
ggtggacagaccgtgccgtttgaacttcagtggatggttatgcattgtgacccgtccaaa
ccagagagagagacttgtgaggaactgccaaagacacctccaaaaccaaagccacgagac
gggctcctggagtcgggatatggagaacagaaagaaggtcgatgcgaagtgacgtgtccc
cgcggtccacctgggctaaatggcactcagggtccaccaggcttcaagggtgaacgaggc
gagatgggaatcccaggggttcgtggcttccccgggccagagggtagagcgggcccgcga
ggcctacctggtcgagatggtcgtcctggagaagacggcttacctggtgccattggggac
aaaggtgaacctggcgttcgtggaccacagggcagccccggtcgtgatggggccaaaggg
gaggtgggtgagagaggtttacctggattccccggggatagaggtccggcaggtgaaaag
ggtgagagtggggaaccaggtattccaggtaggaatggattgcggggcccacggggtgac
ccaggagttccaggtactgccgcagctggaatcaaaggcgaaccaggtgaaaccggccct
cctgggccccaaggattagagggtgtccctggcatacaagggcccagagggcaatcgggc
ccagcggggcctaagggtgaaagaggggaagatggtgatgacggaaagcgaggccctcga
ggttttaggatatcgtgtgacctggagaatggaagctaa
DBGET
integrated database retrieval system