Liolophura japonica (common chiton): 135472386
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Entry
135472386 CDS
T09976
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljp03016
]
135472386
Transfer RNA biogenesis [BR:
ljp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
135472386
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
QVR
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
135472386
NCBI-ProteinID:
XP_064607936
LinkDB
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Position
1:complement(2702084..2721536)
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AA seq
626 aa
AA seq
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MDVSTDSLSPGSEEGNGVLNENLLSSKQLFAHRKPTEKCLPKKGVKDYCPDGSWLDGRRR
ELFWEERRALLAEQRVEKLGSLVRGQWNPDKDLVELEKELGKFWAYMGFVNQQRKWLYPE
EALFLMETNVLEVWYRGVPVSIQQAYSCFLGRAITLDEYQVYAHLRRLGFVVIRHLGQYG
ATRYERQIRLDQHTRKTKRKRKLEGKGCENDGVEDNKSLLPKVTRKDSTNPSSVNPHTAT
NKETEFLTTPANSTAHETKKLCTDEKMMDSEEPLSTWNLPKTNSRITPCFVDFSDIELPS
VCGKNKVVWKSPSPNLLPTNVVYPSDRHVSISQFPINLAKEKKSMLHLEDSENEVNLEFS
FPHFMLKSAYKGIKAKNWHEYKLAKQLKDQKLNCPENSPVAHLWTREITPLIRPQDASCT
ANIQQRLRVIKEFDVQAVKSTTQVDSSLKVAFDVYYPDSKFKKSTPGIPHCRIHVQKQSD
PPPTLSQITEVATRLNDDVSLLCAVVDSASALMCYQCNSSLDYNCQEMFDHDSGNNPLTA
SYCDLYEAKYCIKTTGIWGGIVATHRFCSAKDMGDQCQYIMYPDHDRMYQACVYTCWHDD
CNSSPGLSHLSWPLLLFTALTLYIIR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtcaacagattcactgtcaccaggcagcgaagaaggcaatggtgtactcaat
gagaacttgttaagttccaagcagttgtttgcacatagaaagcccactgagaaatgcctc
cccaaaaaaggagtgaaggattattgcccagatggatcttggctggatgggcgtcgcagg
gagctgttttgggaagagaggagagctctgctggcagagcaacgagtggagaaacttggc
agccttgttagaggacagtggaacccagataaggacctcgttgagctggagaaagaattg
ggtaaattttgggcttacatgggctttgtgaatcagcagagaaaatggctgtacccagag
gaagccctcttcctgatggaaacgaacgttctggaggtttggtacagaggtgttccggtg
agcattcagcaggcgtattcgtgtttcctgggaagggccatcacattggacgagtaccag
gtgtatgcgcacttacgacgcttgggatttgttgtcattcgccacttaggacagtatgga
gcaacaagatatgaaagacagattcgtcttgatcagcacacaagaaaaacaaaacgtaaa
cgaaaattggaaggaaaaggttgtgaaaatgacggtgttgaagataataagagtttatta
cctaaggtgaccagaaaggattcaacgaaccccagcagtgtcaatccacacacagcaaca
aacaaggagacagagtttttgacaacacctgcaaatagcaccgctcatgaaactaagaag
ttgtgtactgatgaaaagatgatggacagtgaagagcctctgtcaacatggaatctgcca
aagaccaacagtcgcatcacaccttgttttgtagacttttcagacattgaactaccgtct
gtatgtggtaaaaacaaggttgtctggaaatcaccatcgccaaatctgttacctacaaat
gtggtgtaccccagtgatagacatgtcagtatttcacaattcccaattaacctcgcaaag
gagaagaaatccatgttacatctagaagactcagaaaatgaagtcaaccttgaattttca
ttcccacacttcatgttgaaatctgcatataaaggaatcaaggccaaaaattggcacgag
tataaattagcaaaacagttaaaagatcaaaagttgaattgcccagagaattccccagta
gcacacctctggaccagggagataactcctctcattagacctcaagatgcgtcgtgcaca
gcaaacatccagcagagacttcgtgtcatcaaggagtttgatgtgcaggcagttaaaagc
acaacacaggtagattcctctctcaaggtcgcctttgatgtctattacccagactccaag
tttaagaagtccacaccaggtatacctcactgcagaattcatgtacagaaacagagtgac
ccacccccaacactgtcacagattacagaggttgctaccaggttaaatgatgatgtctct
ttactctgcgctgtggttgattcagcctctgctctgatgtgctaccagtgtaactctagt
ttggactataactgtcaagaaatgttcgaccatgacagcggtaacaaccccctaacggcg
tcttactgtgacctgtatgaggcaaaatattgtatcaaaacgacgggcatctggggaggt
attgttgccacacaccgtttttgcagtgccaaggacatgggagaccagtgtcagtacatc
atgtaccccgaccatgaccggatgtaccaggcctgtgtgtatacctgctggcatgatgac
tgtaacagctcacctggactctctcacctgagctggcctctcctcttatttacagccctt
accttatacattataagatag
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