Liolophura japonica (common chiton): 135473455
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Entry
135473455 CDS
T09976
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135473455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135473455
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135473455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_17
TPR_7
TPR_9
ANAPC3
ARM_TT21_C
ARM_TT21_5th
TPR_MalT
TPR_10
RPN7
TPR_20
TPR-S
HAT_Syf1_CNRKL1_C
NatB_MDM20
TPR_15
Fis1_TPR_C
Suf
Clathrin
Motif
Other DBs
NCBI-GeneID:
135473455
NCBI-ProteinID:
XP_064609375
LinkDB
All DBs
Position
8:complement(34646826..34676481)
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AA seq
1203 aa
AA seq
DB search
MDAKEIKSTLKAAREAIRQKDFKEALRNCKAVLKADKDNYNALVFIGVAAEGLEQPDQAI
KAFEKATEISPEQILAWQGLCSFYEKSTTQEHSQALVPVYEKLVTLYQGEEAKWIETINK
LAELHSKLGALDRASSCYHKALKAITDPEKQKPIWRKLANMLGSSQSLTPDLENMLLEAY
KVMLTSDESQEQEQFIQPYLELLRKSDDYAELESESNRLSSCYPSCAYPLEAVLQLQLDS
QIGLKQRSAEKVGAVCERLRTMGNQSSVLKLGEGFLNMINKDYTRAQAFLTKGVKSCPSV
ISGYVYLAEVLNCLCDYKGVISTCEQAIGKLKSKEKRLSCPNSLVEDHLNLLTIKSYICQ
RTELTLKKAATLLEEMTNKNPENQEILLLLADVYLKQGEITKVEEFLNTHQSMLTHAGNV
NALKGRVAFARKDFHTAIQHLEQAVKEDGSRSEFFFQLGCVNWSVYETADPSDQSFAEKS
FKQWLQAAKLNPNNAEVFRCLGDYYATVQKDLLKAKRCYQKSFNLNPGDEKTGAALCDSL
TSTGEEEAARSILLRVTSQASAGSGKWAWLRLGLHQVKKTDHTAAMTSFQAALRADPADN
HVWECLAEAYLTRGSYTAALKAFTKALELDPSSVYCLYQISFIKQTLGQFTEAVSEYKAV
LETSPHYVPAMKGLGETLILLARSHLKQSFNLRAKDNCSEAIDYLTQGAAIRPDLSCLWK
LLGDACTVLQPLSDKGFSVSVPLKLIELGDKSSEKKRSLSKEELLKLGARCYGQALKLLP
DCAALWHDLGVNYFYQSQLLSGAAAVDVATKSLHILQKAVMLDPLDFRHWTALGRVACYP
GVNNPSLAQHCFIKSILAERNNVVAWTNLGTLYLKNDNVKLAHDAFTVAQSLDPTYVACW
IGQAMIAETVGHEDAMDLFRHTTELGHHLESALGYGHWVCTVMRDLEKRDSEMYKYCVEQ
MAAIPMASDALSRYLDRMKTNPTAYNMYGLLLEKQGLLQSAAEAFTRAISILETGSGSDG
LITKECWKVGRGYGTVPISGQDLTFEGTCELALVHYKLGQLAQSFQAYERALELASKDED
KSHVYAAMGMVAYKFGDADGVKTALFNCSQTTPSSNHGLAALCSFGFLQSDETLVRAALD
ELISRDTLDLLPQTLLLEMSLQQSPLLTQALTDHPDNPAVRDLQSLVFATPRTREMSPGS
CVC
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagaaatcaagtcaaccctgaaggcagctcgtgaagctatacgccagaaa
gacttcaaggaagctttgagaaactgtaaggctgttttgaaagcagacaaggacaactac
aatgccctagtgtttattggagtagccgctgagggcttagagcagccagaccaggccatt
aaagcttttgagaaagccacagagatttccccagaacaaatccttgcttggcaggggctc
tgcagtttttatgagaagtctacaacgcaggagcacagccaggctctagttcctgtctac
gagaaactagtcacattgtatcaaggggaggaggcgaaatggatcgagaccatcaataag
cttgctgagctgcacagcaaattaggggctctggacagggcgtcatcatgttatcacaag
gccctgaaggctatcacggacccagaaaaacagaaacccatctggaggaagctcgctaac
atgttaggatcatctcagtcacttacaccagatttggagaacatgttactggaggcttac
aaggtcatgctgacatcggacgaatctcaggaacaggaacagttcatacaaccatacctg
gagctactgagaaagagtgatgattatgctgaattggaaagtgaaagtaatcgcctcagc
agttgttaccccagctgtgcttatcctctggaggctgtcctacaacttcagctggattct
caaatagggctcaaacagagatcagcggagaaggttggtgctgtgtgtgagagactgagg
acaatgggaaaccagagctctgtgttaaagttgggggaaggctttctcaacatgattaac
aaagactacaccagagctcaagctttcctaactaaaggtgtcaagagttgtccatcagtt
atctctggctatgtttacctggcagaagtactgaactgtctctgtgattacaaaggtgtg
atcagcacctgtgaacaagccataggaaaactgaagagtaaagaaaaacggctttcttgt
ccaaatagtcttgtagaggatcatttgaaccttctgacaataaagagctatatctgtcag
cggacagaactaactttgaagaaagcagcgactcttcttgaagagatgaccaataaaaat
cctgagaaccaggaaattcttctgctgttggcagatgtctatctgaagcagggggagatc
accaaggtggaggagttcctgaatacacaccagagcatgctaactcatgctggtaatgtg
aatgctttgaaagggagagtggcatttgccagaaaggatttccatacagccattcaacat
cttgagcaggctgtaaaagaagatggttcaaggagtgaattttttttccaacttggatgt
gttaattggtcagtttatgagacagctgacccaagtgaccaatcatttgctgagaaatcc
ttcaagcagtggttgcaggctgcaaaactgaatcctaacaatgcagaagtattcagatgt
ttaggtgattactatgcgactgtgcagaaagatttattgaaggctaagcgatgttaccag
aagtctttcaacctgaaccctggagacgagaagacaggtgctgccctctgtgattcgcta
acatccacaggggaagaggaagcagctcgttccattctgcttagagtgacaagtcaggcc
agtgctggcagtgggaagtgggcctggttgcgtctggggttgcaccaagtgaagaagact
gaccacacagcggcaatgacctcattccaggcggcactcagggctgaccctgctgacaat
catgtgtgggagtgcctggcagaggcctacctgacccgagggagctacacagctgctctt
aaagccttcaccaaagccctggagctggacccttcatctgtatactgtctataccagata
tcattcatcaaacagacactaggccagttcacagaggctgtatcagagtataaggctgtt
ctggaaacctccccacactatgtgccggccatgaaaggtttgggagagactttgattctt
ttggccagaagtcatctcaagcaatcgttcaacttgcgagccaaggataactgctcagag
gccatagattatctgacacagggtgcggctattcgccctgacctctcatgtctgtggaaa
ctcctgggggatgcctgtactgtattacagcctctatctgacaaaggcttcagtgtctcc
gtcccactaaagcttattgaattaggggataagtccagtgagaagaagagaagtttatca
aaggaggagttgctgaagcttggggcaaggtgttatgggcaagccttgaagctcctccca
gattgtgctgccctgtggcatgaccttggggtcaactatttctaccaatcacagctcctg
tctggagcagctgcagtcgacgtggcaacaaaatctctccatattctacagaaggctgtt
atgttagaccccctggatttcaggcactggactgctctgggcagagtagcatgttaccct
ggtgtgaacaatcccagcctagcccagcactgtttcatcaagtccatcctggcagaacgc
aataatgtagtggcatggacaaacctggggactctgtacctgaaaaatgacaatgttaag
cttgctcatgatgccttcactgtggctcagagcctagatcctacatatgtagcctgctgg
attggtcaggccatgatagcagagactgtagggcatgaggatgccatggacctattcagg
cacaccacagagctgggccatcatttggagtctgctctgggttatggtcactgggtgtgc
actgtgatgagggacctggagaagagagactctgagatgtacaagtactgtgtagagcag
atggctgccatacccatggcctctgatgctctgtccaggtatctggatcgaatgaaaacc
aatccaacagcttataacatgtatggcctcttgctggaaaaacaaggcctacttcagtca
gcagctgaggctttcacaagggccatctctatactggagacaggaagtggctctgatgga
cttatcacaaaggaatgctggaaggttggaagaggctatggcacagtacctatctctggg
caggacctgacctttgaaggcacctgtgaactggcactggtgcattacaagctgggacag
ctcgctcagagcttccaagcatacgagagagccctggagcttgccagtaaagatgaggat
aaatcccatgtgtacgctgccatgggaatggttgcctataagtttggagatgcagatggt
gttaaaacagctctgtttaactgctcacaaaccacgccttcatccaatcatggcctggct
gctttgtgcagctttggcttcctccaatcagatgagacgttagtgagggcagctctggat
gagctcatcagcagggacaccctggatctgctgcctcagaccctgttgttggagatgtct
ctgcagcagagtcccctgttaacccaggcactcactgaccacccagataaccctgcagtc
agagatctacagtccctcgtttttgctacgcctcgtaccagagaaatgtcaccaggcagc
tgcgtctgctaa
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integrated database retrieval system
