Leptospira kobayashii: LPTSP3_g02650
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Entry
LPTSP3_g02650 CDS
T07530
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPTSP3_g02650 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkb03019
]
LPTSP3_g02650 (recQ_1)
03400 DNA repair and recombination proteins [BR:
lkb03400
]
LPTSP3_g02650 (recQ_1)
Enzymes [BR:
lkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPTSP3_g02650 (recQ_1)
Messenger RNA biogenesis [BR:
lkb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPTSP3_g02650 (recQ_1)
DNA repair and recombination proteins [BR:
lkb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPTSP3_g02650 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
RQC
Motif
Other DBs
NCBI-ProteinID:
BDA77335
LinkDB
All DBs
Position
1:complement(275877..277721)
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AA seq
614 aa
AA seq
DB search
MDLLTSLHSQFGFSQFRSGQKEAIESVLAGNDTLAILPTGAGKSLIYQLPASLQKDKLTL
VISPLIALMKDQTESLLSKGIPAAFCNSTQDELVQMKTIAQAVNGSLRVLLISPERALSP
SFLKVFKEMNLFSLVVDEAHCVSQWGHDFRPEYRQLHFLRERHPSPNFPILALTATATEK
VRTDVQAALGMKFPKMVLSTFFRPNLKFSVEYPNTERDKADRLFELLEPWKDDKKFAGRT
IVYCATRKKTDEVFELLKDFGFTAGKYHAGRTDGIRERTQNAYTGGKVPILVATNAFGMG
MDQPDVRLVVHYQVPASLEAYYQEAGRAGRDNKPADCVLFYKNADVATQAFMISKESNFK
GGDSLLKHIKDYANQEKCRQVQLCEYFGESIEPCGSCDICSHSTNGKDRKDFLHAEEIKQ
RKKEEKRTYEFDPNEEEWILNFLAEHPGVFGKTIIAKTLAGKTTKDVLRYRMERNPFHAK
LKHIPEEAIIAKLESWTEQRKILVAGSKYPKLYLPQFSPVKKRIGKEGDSESLVKKTKTP
TVNSQILRELMNYRDRKSRQLKWKKFMVFQNPVLKRIAERKPRTLSELEATKGIGPAKVE
KFGSEILEILEKWR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
ttggatcttttaacttcacttcattctcaatttggcttcagccagtttcgctccggtcaa
aaggaagcgatcgaatccgttcttgccggcaatgatactcttgccattcttcctacggga
gcgggcaaatcccttatctaccaattgccggcaagtctccaaaaagacaaactaactctt
gttatttctcctttgatcgcacttatgaaagaccagacggagagcctcctctccaaagga
ataccggccgcattttgcaattccacgcaagacgaattggtgcagatgaaaacgatagca
caggcggtaaacggatctttgcgtgttcttctgatttcccccgagagagcgctctccccg
agttttctaaaagtattcaaagaaatgaatttattttctctcgttgtagatgaagcacat
tgtgtttctcaatggggacatgacttccgtcccgagtacagacagcttcattttttaaga
gaaaggcacccttcacctaactttcctattttggcgcttactgcgactgcaactgaaaaa
gtaagaaccgatgtacaagccgccctgggaatgaaatttcccaaaatggtactttccact
ttctttcgtcccaatcttaaattttccgtggaatatccgaatacggaacgtgataaggca
gatcgtctttttgaacttttggaaccttggaaggatgataaaaaatttgcaggacgtaca
atcgtttactgcgccacccgtaaaaaaacggacgaagtgtttgaattgctaaaagacttc
gggttcactgcggggaagtaccacgcgggacgtacggacggaatccgggaaagaactcaa
aatgcttacacaggaggaaaagttcccatccttgttgcgacaaacgcattcggaatgggg
atggatcaacctgacgtacgtttggtggttcattaccaagttccggcttctctcgaagcc
tactaccaggaagcaggccgggcaggaagggataacaaaccggccgactgtgtattgttt
tataaaaacgcggacgttgccacccaagcctttatgatctccaaagaaagcaatttcaaa
ggaggagatagtttactcaaacatatcaaggattatgccaatcaggaaaaatgcagacag
gttcaactttgcgaatatttcggagagtcgatcgaaccttgcggatcctgtgatatttgt
tcccattcgacaaacggaaaagacagaaaggactttttgcatgcggaagaaatcaaacaa
cgcaaaaaagaagagaaacggacctacgaattcgacccgaatgaagaggaatggattctg
aattttttagcggaacatcccggagtcttcggaaaaaccatcatagcaaaaacgttagcc
ggtaaaaccacgaaagatgtacttcgttaccgaatggaaagaaacccgttccacgcaaaa
ctaaaacatatcccggaagaagcaatcatagccaaattggaatcctggacggaacaaagg
aaaatcctggtcgcaggctccaaatacccgaaactctaccttccccaattttctcccgta
aagaaaagaattgggaaagaaggcgattcggaaagcctggtaaaaaaaaccaaaactcct
actgtcaactcacagatattacgtgaattgatgaattaccgggacagaaaatcccgccag
ctcaaatggaaaaagtttatggtcttccaaaaccctgttctgaaacgaattgcggaaagg
aaacccagaactctttccgaactggaagcgaccaaaggaatcggtccggccaaagtagaa
aagtttggaagcgaaatactggaaatcttggaaaagtggagatga
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