Leptospira kobayashii: LPTSP3_g20000
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Entry
LPTSP3_g20000 CDS
T07530
Symbol
csdB
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb00450
Selenocompound metabolism
lkb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LPTSP3_g20000 (csdB)
Enzymes [BR:
lkb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LPTSP3_g20000 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LPTSP3_g20000 (csdB)
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDA79070
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Position
1:complement(2275971..2277215)
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AA seq
414 aa
AA seq
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MKLDPYRIKEDFPILSTLTPNGKPLVYLDNGASSQKPKSVIDGTSKYYEEENANIHRGIY
HLSQHATELFEKSRIKASHFFGSPCAKSMIFTRGATESINLVAQAWGRANVSEGDEIVLS
VQEHHSNLVPWQMLAQEKGAILRFIPIKEDTTYDLSNLDSIINRRTKIVAVSHMSNVTGT
IHDVKPIITRAHQVGAKVLLDGAQAASHLKVNLTSLDVDFYAFSAHKMMGPTGVGMLYGR
EEILEAMPPWLGGGDMIENVDLEISTYANLPAKLEAGTPNIAGVIGFAYALDYLTKLGME
NIHEHEMEITEYALTKLNRLGGITIYGTDDLDKRGGVISFTLEGVHPHDVGSILDEEGIA
IRVGHHCCQPLMKLWKIPGTCRASFYAYTTKEDVDSLVASLEKVKSIFSRVAKR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatccttatcgaatcaaagaagattttcccatcctatctacgttgactccc
aatgggaaacctcttgtgtatttggacaatggcgcatcttctcaaaaaccgaagtcggtg
atcgacggcacttccaaatactacgaagaagagaatgcaaacatccacagagggatctat
catctctcccagcatgccaccgaactatttgaaaaatccagaatcaaagcatctcatttt
ttcggatccccttgtgccaaatccatgatcttcacacgtggcgcgactgagtccatcaat
ctggtcgcacaagcctggggaagagccaatgtaagcgaaggggatgaaattgtactcagt
gtacaggaacatcattccaatctggttccatggcagatgcttgcccaagagaaaggtgca
attttacgttttattcctatcaaagaagacaccacttatgatctttccaacttggattcc
atcataaaccgtagaactaagatcgttgcagtatcacatatgtccaatgtgaccggaacc
atccatgatgtgaaaccgatcataactagggcccaccaagtgggtgctaaagtgcttttg
gacggagcgcaagctgcatcccatctgaaggtgaacttaacttccttggatgttgatttt
tacgctttctcggctcataagatgatggggccgacgggagtaggaatgctttacggaaga
gaagaaattctggaagctatgcctccctggctcggtggaggggatatgattgaaaacgtg
gatttggaaatttccacttatgcaaatcttcccgccaaactggaagcaggcacacccaat
atcgcgggtgtgataggattcgcttatgcattggattatctcaccaaattgggaatggaa
aatatccatgaacatgaaatggaaatcacggaatatgcgcttaccaaattaaatcggtta
ggtggtattaccatttacggaacggatgatctggacaaaagaggaggagtgatttccttc
actttggaaggagtacatcctcatgacgtgggttcgattttggatgaagaagggattgcc
attcgggtgggacatcattgttgccaaccgcttatgaaactatggaaaattccaggaact
tgtagggcttccttttatgcttatacaactaaagaagatgttgattctttggttgcgagt
ttggagaaagtgaagtccatattttcccgtgttgccaaaagatag
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