Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_1222
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Entry
WANG_1222 CDS
T01526
Name
(GenBank) DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Pathway
lke03030
DNA replication
lke03430
Mismatch repair
lke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WANG_1222
03430 Mismatch repair
WANG_1222
03440 Homologous recombination
WANG_1222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lke03032
]
WANG_1222
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_1222
Enzymes [BR:
lke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WANG_1222
DNA replication proteins [BR:
lke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WANG_1222
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WANG_1222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
BRCT
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AEG40917
LinkDB
All DBs
Position
complement(1374928..1375881)
Genome browser
AA seq
317 aa
AA seq
DB search
MSIYVKDGILHVAGAQDKLRQKGQEKPDFLTNYTMLDIETTGLSPYRDRITELGAVKVRN
NQIVDQYTNLVKFPGNNRVPAFITKLNGITEEQIINEGIPAEQAIKEFREFIGDDIIIGY
NVNFDLNFLYDLSQKYGLPITNNNYVDVLRLARAYYPRQHNRLIDCMQRAGIAQVEQHHG
LADSLDTIKVYNDFNRHFTEDLLEKARGKIKNVDLTGDDVDYTQLGFRNPIQNKRIVLSG
HLHLNEADAGKMITNMGGQSDNNVMANTNYLIMGDHDFFQHDDENLEKARALIKDGAKIK
RLSESFFLGMLDDWARS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaagatgggatcttgcatgttgcaggagcccaagacaaattacgc
caaaaagggcaagaaaagccagattttttaacgaattatacaatgctggatattgaaaca
actggtttgagtccatatcgtgatcgtattactgagcttggcgcggtgaaggtgcgcaat
aatcagattgttgatcagtatactaatctagttaaattcccaggaaataatcgagtgcca
gcctttattaccaagctaaatgggattactgaagagcagatcattaatgaaggaatccct
gctgagcaggcgattaaagagtttcgagaattcattggggatgacattatcattggctat
aatgtcaactttgatttgaattttttatatgatttgagtcaaaaatatggcttaccgatt
acaaacaataactatgttgatgttttgcgcctggctagagcatattatcctagacagcat
aatcgcttgatcgattgcatgcaacgagctggcatcgctcaagtagagcagcaccatggc
ttagctgattcattagatacgattaaggtttataacgattttaatcggcattttactgaa
gatttgttagaaaaggctcgcggtaaaataaaaaatgttgatttaactggcgatgatgta
gactatacccaattaggttttagaaatcctattcaaaacaaacgaattgttttatctggt
catcttcatttgaatgaagctgatgcaggcaagatgataactaacatgggtggacagtct
gataataatgtaatggcgaataccaattatttaattatgggtgatcatgacttcttccag
catgatgatgaaaatttggaaaaagctcgagcattaattaaagatggcgcaaagatcaag
cgactatcagaaagtttcttcttagggatgctggatgattgggcacgtagctaa
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